RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 18 ✖

bioproject 1

  • PRJNA683669 · 18 ✖

analysis 1

  • blastn · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1174772 1174772 PRJNA683669_P_NODE_1001_length_1245_cov_6.674061_g881_i0 PRJNA683669 1001 1245 6.674061 83.09205945 Orthorubulavirus 2560195 Viruses Viruses 2283 0   NTclustered gi|1394370381|gb|MH362816.1| 2560580 g881 i0 99.759 83.7927710843373 1245 3 100 0 1 1245 1803 3047 Mammalian orthorubulavirus 5 strain CAN, complete genome blastn 104322 2283 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
1174947 1174947 PRJNA683669_P_NODE_461_length_1654_cov_5.636939_g396_i0 PRJNA683669 461 1654 5.636939 93.23497106 Orthorubulavirus 2560195 Viruses Viruses 3038 0   NTclustered gi|2507986953|gb|OQ348510.1| 2560580 g396 i0 99.819 76.3022974607013 1654 3 100 0 1 1654 69 1722 Mammalian orthorubulavirus 5 isolate HLJ-W, complete genome blastn 126204 3038 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
2450139 2450139 PRJNA683669_P_NODE_1662_length_1002_cov_2.212056_g1502_i0 PRJNA683669 1662 1002 2.212056 22.16480112 Orthorubulavirus 2560195 Viruses Viruses 1845 0   NTclustered gi|2325361299|gb|OL548911.1| 149595 g1502 i0 99.9 83.998003992016 1002 1 100 0 1 1002 680 1681 Canine parainfluenza virus isolate SH2021 hemagglutinin-neuraminidase (HN) gene, complete cds blastn 84166 1851 0.9967585089141 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae   Canine parainfluenza virus
6278863 6278863 PRJNA683669_P_NODE_18045_length_305_cov_0.987069_g17813_i0 PRJNA683669 18045 305 0.987069 3.01056045 Orthorubulavirus 2560195 Viruses Viruses 558 1.37e-154   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g17813 i0 99.672 67.9704918032787 305 1 100 0 1 305 3129 3433 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 20731 558 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
6278878 6278878 PRJNA683669_P_NODE_20365_length_286_cov_1.248826_g20133_i0 PRJNA683669 20365 286 1.248826 3.57164236 Cripavirus 144051 Viruses Viruses 424 4.86e-114   NTclustered gi|2196304203|gb|MZ679075.1| 1955141 g20133 i0 93.357 7.24825174825175 286 19 100 0 1 286 697 982 MAG: Cripavirus sp. isolate 165b-k141_225497 nonstructural polyprotein gene, complete cds; and capsid polyprotein gene, partial cds blastn 2073 424 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.
7043565 7043565 PRJNA683669_P_NODE_14306_length_342_cov_1.784387_g14075_i0 PRJNA683669 14306 342 1.784387 6.10260354 Hangzhou hydrellia griseola dicistrovirus 1 2905414 Viruses Viruses 424 5.95e-114   NTclustered gi|2170811221|gb|MZ209736.1| 2905414 g14075 i0 93.357 3.34502923976608 286 19 84 0 57 342 7749 8034 MAG: Hangzhou hydrellia griseola dicistrovirus 1 isolate YSP1FY336, complete genome blastn 1144 424 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Hangzhou hydrellia griseola dicistrovirus 1
8318260 8318260 PRJNA683669_P_NODE_9187_length_422_cov_1.191977_g8956_i0 PRJNA683669 9187 422 1.191977 5.03014294 Dicistroviridae sp. 1955144 Viruses Viruses 680 0   NTclustered gi|1836405876|gb|MN905999.1| 1955144 g8956 i0 95.735 5.39810426540284 422 18 100 0 1 422 8143 8564 MAG: Dicistroviridae sp. isolate wag171dic3 genomic sequence, sequence blastn 2278 680 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
8827865 8827865 PRJNA683669_P_NODE_67_length_2955_cov_3.656142_g54_i0 PRJNA683669 67 2955 3.656142 108.0389961 Orthorubulavirus 2560195 Viruses Viruses 5446 0   NTclustered gi|1394370381|gb|MH362816.1| 2560580 g54 i0 99.932 83.7749576988156 2955 2 100 0 1 2955 6071 3117 Mammalian orthorubulavirus 5 strain CAN, complete genome blastn 247555 5446 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10868849 10868849 PRJNA683669_P_NODE_10009_length_405_cov_2.283133_g9778_i0 PRJNA683669 10009 405 2.283133 9.24668865 Chrocomolt virus 3129476 Viruses Viruses 553 8.739999999999998e-153   NTclustered gi|2717317674|gb|PP171924.1| 3129476 g9778 i0 94.215 15.762962962963 363 20 89 1 16 377 4400 4038 MAG: Chrocomolt virus isolate CC1B_k141_48525 genomic sequence blastn 6384 553 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Chrocomolt virus
12654250 12654250 PRJNA683669_P_NODE_15930_length_325_cov_1.099206_g15699_i0 PRJNA683669 15930 325 1.099206 3.5724195 Cripavirus 144051 Viruses Viruses 440 5.579999999999999e-119   NTclustered gi|2196304203|gb|MZ679075.1| 1955141 g15699 i0 91.077 9.98769230769231 325 29 100 0 1 325 1548 1872 MAG: Cripavirus sp. isolate 165b-k141_225497 nonstructural polyprotein gene, complete cds; and capsid polyprotein gene, partial cds blastn 3246 440 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Cripavirus sp.
13418996 13418996 PRJNA683669_P_NODE_32171_length_243_cov_1.129412_g31939_i0 PRJNA683669 32171 243 1.129412 2.74447116 Dicistroviridae sp. 1955144 Viruses Viruses 364 2.479999999999999e-96   NTclustered gi|2756423324|gb|PP745452.1| 1955144 g31939 i0 93.802 7.96296296296296 242 15 99 0 2 243 2953 3194 MAG: Dicistroviridae sp. isolate 129_15506 genomic sequence blastn 1935 364 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
15203559 15203559 PRJNA683669_P_NODE_25472_length_254_cov_1.276243_g25240_i0 PRJNA683669 25472 254 1.276243 3.24165722 Viruses 10239 Viruses Viruses 357 4.36e-94   NTclustered gi|2756423469|gb|PP745525.1| 1955144 g25240 i0 92.095 9.91732283464567 253 20 99 0 2 254 373 625 MAG: Dicistroviridae sp. isolate 196_164348 genomic sequence blastn 2519 359 0.994428969359331 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.
15203585 15203585 PRJNA683669_P_NODE_31352_length_244_cov_1.766082_g31120_i0 PRJNA683669 31352 244 1.766082 4.30924008 Orthorubulavirus 2560195 Viruses Viruses 451 1.86e-122   NTclustered gi|1394370381|gb|MH362816.1| 2560580 g31120 i0 100 66.0040983606557 244 0 100 0 1 244 6486 6243 Mammalian orthorubulavirus 5 strain CAN, complete genome blastn 16105 451 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
17752691 17752691 PRJNA683669_P_NODE_21614_length_279_cov_1.092233_g21382_i0 PRJNA683669 21614 279 1.092233 3.04733007 Orthorubulavirus 2560195 Viruses Viruses 510 3.5299999999999996e-140   NTclustered gi|1394370381|gb|MH362816.1| 2560580 g21382 i0 99.642 67.741935483871 279 1 100 0 1 279 12351 12629 Mammalian orthorubulavirus 5 strain CAN, complete genome blastn 18900 510 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
22852255 22852255 PRJNA683669_P_NODE_14638_length_339_cov_0.868421_g14407_i0 PRJNA683669 14638 339 0.868421 2.94394719 Viruses 10239 Viruses Viruses 516 9.44e-142   NTclustered gi|2170811218|gb|MZ209732.1| 2905414 g14407 i0 94.1 10.7109144542773 339 20 100 0 1 339 4882 4544 MAG: Hangzhou hydrellia griseola dicistrovirus 1 isolate XHQTFY46, complete genome blastn 3631 521 0.990403071017274 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Hangzhou hydrellia griseola dicistrovirus 1
24126906 24126906 PRJNA683669_P_NODE_34239_length_240_cov_2.305389_g34007_i0 PRJNA683669 34239 240 2.305389 5.5329336 Orthorubulavirus 2560195 Viruses Viruses 444 3.05e-120   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g34007 i0 100 69.75 240 0 100 0 1 240 1204 1443 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 16740 444 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24126928 24126928 PRJNA683669_P_NODE_5979_length_525_cov_2.714602_g5750_i0 PRJNA683669 5979 525 2.714602 14.2516605 Orthorubulavirus 2560195 Viruses Viruses 965 0   NTclustered gi|2050235017|gb|MT890698.1| 2560580 g5750 i0 99.81 80.9752380952381 525 1 100 0 1 525 6509 7033 Mammalian orthorubulavirus 5 strain SH/2015/122/PIV5, complete genome blastn 42512 965 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
24891061 24891061 PRJNA683669_P_NODE_17500_length_309_cov_2.665254_g17268_i0 PRJNA683669 17500 309 2.665254 8.23563486 Mitovirus sp. 2587224 Viruses Viruses 121 7.8e-23   NTclustered gi|1698234317|gb|MN033515.1| 2587224 g17268 i0 93.75 0.258899676375405 80 5 26 0 199 278 112 33 MAG: Mitovirus sp. isolate H1_Rhizo_26_FD_scaffold_6751 sequence blastn 80 121 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;