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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA683669" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA683669 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664858 664858 PRJNA683669_P_NODE_11021_length_388_cov_4.882540_g10790_i0 PRJNA683669 11021 388 4.88254 18.9442552 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 292 2.01e-74   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g10790 i0 84.88 25.139175257732 291 42 75 2 43 332 330 41 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 9754 292 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1940970 1940970 PRJNA683669_P_NODE_2662_length_806_cov_4.182810_g2467_i0 PRJNA683669 2662 806 4.18281 33.7134486 Paramoeba perurans 437603 Discosea other_Eukaryota 627 1.0599999999999999e-174   NTclustered gi|2048770422|gb|MW534135.1| 437603 g2467 i0 82.289 43.227047146402 734 120 90 9 64 792 741 13 Paramoeba perurans isolate PPER_00019895 multifunctional chaperone mRNA, complete cds blastn 34841 627 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
3215703 3215703 PRJNA683669_P_NODE_12803_length_361_cov_1.868056_g12572_i0 PRJNA683669 12803 361 1.868056 6.74368216 Dictyostelium discoideum 44689 Evosea other_Eukaryota 63.9 1.58e-5   NTclustered gi|66811337|ref|XM_634285.1| 352472 g12572 i0 95 0.451523545706371 40 2 11 0 105 144 309 348 Dictyostelium discoideum AX4 hypothetical protein (DDB_G0282901) mRNA, complete cds blastn 163 63.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3215755 3215755 PRJNA683669_P_NODE_18563_length_300_cov_1.330396_g18331_i0 PRJNA683669 18563 300 1.330396 3.991188 Cavenderia fasciculata 261658 Evosea other_Eukaryota 97.1 1.27e-15   NTclustered gi|470265703|ref|XM_004361527.1| 261658 g18331 i0 82.114 0.52 123 13 38 5 168 281 156 34 Cavenderia fasciculata annexin VII (nxnA), partial mRNA blastn 156 97.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5003350 5003350 PRJNA683669_P_NODE_4484_length_615_cov_1.516605_g4260_i0 PRJNA683669 4484 615 1.516605 9.32712075 Vermamoeba 1260114 Tubulinea other_Eukaryota 1081 0   NTclustered gi|300078496|gb|GU001158.1| 5778 g4260 i0 98.374 95.9886178861789 615 10 100 0 1 615 2337 2951 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 59033 1081 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7043576 7043576 PRJNA683669_P_NODE_15686_length_327_cov_1.818898_g15455_i0 PRJNA683669 15686 327 1.818898 5.94779646 Copromyxa protea 931554 Tubulinea other_Eukaryota 281 3.6e-71   NTclustered gi|508737347|dbj|AB766053.1| 931554 g15455 i0 82.65 1.35779816513761 317 55 97 0 11 327 1 317 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 444 281 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
7552702 7552702 PRJNA683669_P_NODE_1086_length_1204_cov_3.203360_g958_i0 PRJNA683669 1086 1204 3.20336 38.5684544 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 850 0   NTclustered gi|511083902|dbj|AK419160.1| 5759 g958 i0 80.622 91.1179401993355 1125 196 93 20 62 1175 29 1142 Entamoeba histolytica cDNA clone: Xeh-003B20, actin, complete cds, strain: HM-1:IMSS blastn 109706 850 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
8318030 8318030 PRJNA683669_P_NODE_10707_length_393_cov_2.150000_g10476_i0 PRJNA683669 10707 393 2.15 8.4495 Paramoeba perurans 437603 Discosea other_Eukaryota 355 2.56e-93   NTclustered gi|2048770422|gb|MW534135.1| 437603 g10476 i0 83.684 26.972010178117 380 58 96 3 2 379 390 13 Paramoeba perurans isolate PPER_00019895 multifunctional chaperone mRNA, complete cds blastn 10600 355 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
9593558 9593558 PRJNA683669_P_NODE_20188_length_287_cov_1.401869_g19956_i0 PRJNA683669 20188 287 1.401869 4.02336403 Paramoeba perurans 437603 Discosea other_Eukaryota 152 2.5399999999999996e-32   NTclustered gi|2635491373|gb|OR923386.1| 437603 g19956 i0 81.407 2.90243902439024 199 26 68 9 24 218 914 723 Paramoeba perurans clone PPER_00013037 heat shock 90 mRNA, complete cds blastn 833 152 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
10868877 10868877 PRJNA683669_P_NODE_13549_length_352_cov_1.103943_g13318_i0 PRJNA683669 13549 352 1.103943 3.88587936 Dictyostelium purpureum 5786 Evosea other_Eukaryota 272 2.35e-68   NTclustered gi|330845923|ref|XM_003294765.1| 5786 g13318 i0 81.818 11.1392045454545 330 54 93 5 3 329 2886 2560 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_96126), mRNA blastn 3921 272 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
10868922 10868922 PRJNA683669_P_NODE_19169_length_295_cov_0.891892_g18937_i0 PRJNA683669 19169 295 0.891892 2.6310814 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 65.8 3.52e-6   NTclustered gi|470372090|ref|XM_004332845.1| 1257118 g18937 i0 95.122 0.379661016949153 41 2 14 0 225 265 4226 4186 Acanthamoeba castellanii str. Neff putative DNA helicase (ACA1_144810), partial mRNA blastn 112 65.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
12144478 12144478 PRJNA683669_P_NODE_710_length_1408_cov_8.776779_g624_i0 PRJNA683669 710 1408 8.776779 123.57704832 Paramoeba branchiphila 308475 Discosea other_Eukaryota 1251 0   NTclustered gi|226347442|gb|FJ807261.1| 308475 g624 i0 85.465 65.4225852272727 1204 169 85 6 141 1341 1202 2 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 92115 1251 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
13419005 13419005 PRJNA683669_P_NODE_32831_length_242_cov_1.485207_g32599_i0 PRJNA683669 32831 242 1.485207 3.59420094 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 442 1.1099999999999995e-119   NTclustered gi|909719645|gb|KT185625.1| 5778 g32599 i0 99.587 94.4834710743802 242 1 100 0 1 242 6093 6334 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 22865 442 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17242964 17242964 PRJNA683669_P_NODE_34254_length_238_cov_3.593939_g34022_i0 PRJNA683669 34254 238 3.593939 8.55357482 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 270 5.42e-68   NTclustered gi|575488798|gb|KF772979.1| 180228 g34022 i0 88.393 92.8025210084034 224 26 94 0 2 225 224 1 Paramoeba pemaquidensis strain PA027 beta actin mRNA, partial cds blastn 22087 270 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
22342223 22342223 PRJNA683669_P_NODE_19618_length_291_cov_1.059633_g19386_i0 PRJNA683669 19618 291 1.059633 3.08353203 Paramoeba perurans 437603 Discosea other_Eukaryota 272 1.8999999999999998e-68   NTclustered gi|2048770422|gb|MW534135.1| 437603 g19386 i0 86.345 9.43986254295533 249 34 86 0 1 249 493 741 Paramoeba perurans isolate PPER_00019895 multifunctional chaperone mRNA, complete cds blastn 2747 272 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
22342233 22342233 PRJNA683669_P_NODE_20558_length_285_cov_1.334906_g20326_i0 PRJNA683669 20558 285 1.334906 3.8044821 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 448 2.8699999999999997e-121   NTclustered gi|909719645|gb|KT185625.1| 5778 g20326 i0 95.105 24.5719298245614 286 10 99 4 2 285 7047 6764 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 7003 448 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
23617820 23617820 PRJNA683669_P_NODE_20219_length_287_cov_1.102804_g19987_i0 PRJNA683669 20219 287 1.102804 3.16504748 Didymium spongiosum 289992 Evosea other_Eukaryota 193 1.5e-44   NTclustered gi|2161226356|gb|MZ313554.1| 289992 g19987 i0 79.322 7.68989547038328 295 46 100 11 1 287 7511 7798 Mucilago crustacea 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2207 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium spongiosum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;