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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA682774" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA682774 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1174707 1174707 PRJNA682774_P_NODE_4041_length_249_cov_1.772727_g4012_i0 PRJNA682774 4041 249 1.772727 4.41409023 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.1 3.74e-5   NTclustered gi|686635860|ref|XM_009312101.1| 71804 g4012 i0 92.857 0.493975903614458 42 3 17 0 172 213 3992 3951 Trypanosoma grayi hypothetical protein partial mRNA blastn 123 62.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
1940628 1940628 PRJNA682774_P_NODE_2802_length_277_cov_1.215686_g2773_i0 PRJNA682774 2802 277 1.215686 3.36745022 Bodo saltans 75058 Euglenozoa other_Eukaryota 403 6.11e-108   NTclustered gi|206598205|gb|FJ168554.1| 75058 g2773 i0 93.091 98.9458483754513 275 19 99 0 3 277 14790 15064 Bodo saltans clone fosmid 5M18, complete sequence blastn 27408 403 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
3726529 3726529 PRJNA682774_P_NODE_4023_length_250_cov_0.881356_g3994_i0 PRJNA682774 4023 250 0.881356 2.20339 Leishmania 5658 Euglenozoa other_Eukaryota 311 3.38e-80   NTclustered gi|3386645|gb|M87878.1| 5660 g3994 i0 90.417 104.34 240 17 95 3 1 237 16 252 Leishmania braziliensis heat shock protein 70 (HSP70) mRNA, partial cds blastn 26085 313 0.993610223642173 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
7043310 7043310 PRJNA682774_P_NODE_3166_length_262_cov_0.835979_g3137_i0 PRJNA682774 3166 262 0.835979 2.19026498 Euglena gracilis 3039 Euglenozoa other_Eukaryota 132 2.98e-26   NTclustered gi|1863320058|gb|MT583911.1| 3039 g3137 i0 83.571 10.2900763358779 140 23 53 0 119 258 275 136 Euglena gracilis 60S large subunit ribosomal protein eL42 mRNA, complete cds blastn 2696 132 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Euglena Euglena gracilis
12144016 12144016 PRJNA682774_P_NODE_2830_length_276_cov_1.014778_g2801_i0 PRJNA682774 2830 276 1.014778 2.80078728 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 171 6.72e-38   NTclustered gi|686630350|ref|XM_009309346.1| 71804 g2801 i0 78.136 1.8695652173913 279 53 99 7 2 276 847 1121 Trypanosoma grayi ribosomal protein L13 partial mRNA blastn 516 171 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
18516719 18516719 PRJNA682774_P_NODE_1615_length_348_cov_1.134545_g1586_i0 PRJNA682774 1615 348 1.134545 3.9482166 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 182 4.03e-41   NTclustered gi|510034363|gb|KC544913.1| 5698 g1586 i0 82.16 25.8362068965517 213 36 61 2 128 339 79 290 Trypanosoma rangeli clone TR01411.4 mitochondrial heat shock gene, complete cds; nuclear gene for mitochondrial product blastn 8991 182 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
19791585 19791585 PRJNA682774_P_NODE_3376_length_254_cov_1.187845_g3347_i0 PRJNA682774 3376 254 1.187845 3.0171263 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 239 1.65e-58   NTclustered gi|686644227|ref|XM_009316284.1| 71804 g3347 i0 83.858 5.47637795275591 254 37 99 4 3 254 136 387 Trypanosoma grayi 40S ribosomal protein S3 partial mRNA blastn 1391 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
23617537 23617537 PRJNA682774_P_NODE_3079_length_265_cov_1.218750_g3050_i0 PRJNA682774 3079 265 1.21875 3.2296875 Herpetomonas muscarum 5718 Euglenozoa other_Eukaryota 237 6.23e-58   NTclustered gi|529495907|gb|KC503386.1| 5718 g3050 i0 83.209 34.8452830188679 268 36 100 7 1 265 151 412 Herpetomonas muscarum clone H1_2.5.1.6 methionine adenosyltransferase gene, complete cds blastn 9234 237 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Herpetomonas Herpetomonas muscarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;