RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA682774" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA682774 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664628 664628 PRJNA682774_P_NODE_1721_length_339_cov_1.759398_g1692_i0 PRJNA682774 1721 339 1.759398 5.96435922 uncultured Cercozoa 175275 SAR_Eukaryotes SAR_Eukaryotes 604 1.9599999999999993e-168   NTclustered gi|512134091|gb|KC575315.1| 175275 g1692 i0 98.82 100.330383480826 339 4 100 0 1 339 373 35 Uncultured cercozoan clone A.3.2 18S ribosomal RNA gene, partial sequence blastn 34012 604 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
17242572 17242572 PRJNA682774_P_NODE_2394_length_294_cov_3.208145_g2365_i0 PRJNA682774 2394 294 3.208145 9.4319463 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 377 3.96e-100   NTclustered gi|238617605|gb|FJ973380.1| 45107 g2365 i0 90.559 97.2925170068027 286 25 97 2 1 285 1191 1475 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 28604 377 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
24890788 24890788 PRJNA682774_P_NODE_2500_length_289_cov_3.226852_g2471_i0 PRJNA682774 2500 289 3.226852 9.32560228 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 305 1.86e-78   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g2471 i0 86.159 33.8477508650519 289 33 99 6 3 289 4009 3726 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 9782 305 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;