RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA682774" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682774 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3215461 3215461 PRJNA682774_P_NODE_4203_length_249_cov_0.886364_g4174_i0 PRJNA682774 4203 249 0.886364 2.20704636 Filobasidium floriforme 5210 Fungi Fungi 222 1.62e-53   NTclustered gi|2185533625|ref|XM_046181911.1| 5210 g4174 i0 87.831 62.0883534136546 189 23 76 0 5 193 222 34 Filobasidium floriforme ADP-ribosylation factor (HD553DRAFT_329185), partial mRNA blastn 15460 222 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Filobasidiales Filobasidiaceae Filobasidium Filobasidium floriforme
4492566 4492566 PRJNA682774_P_NODE_1624_length_347_cov_2.846715_g1595_i0 PRJNA682774 1624 347 2.846715 9.87810105 Tilletiopsis washingtonensis 58919 Fungi Fungi 91.6 6.96e-14   NTclustered gi|1423569936|ref|XM_025739965.1| 58919 g1595 i0 84.211 12.9048991354467 95 13 27 2 63 156 39 132 Tilletiopsis washingtonensis ribosomal protein S14 (FA09DRAFT_290831), partial mRNA blastn 4478 91.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales   Tilletiopsis Tilletiopsis washingtonensis
8317801 8317801 PRJNA682774_P_NODE_2987_length_268_cov_2.343590_g2958_i0 PRJNA682774 2987 268 2.34359 6.2808212 Pseudozyma flocculosa 84751 Fungi Fungi 156 1.82e-33   NTclustered gi|630971699|ref|XM_007884067.1| 1277687 g2958 i0 88.372 0.958955223880597 129 15 48 0 139 267 355 227 Pseudozyma flocculosa PF-1 uncharacterized protein (PFL1_06522), partial mRNA blastn 257 156 1 Eukaryota Opisthokonta Fungi Basidiomycota Ustilaginomycetes Ustilaginales Ustilaginaceae Pseudozyma Pseudozyma flocculosa
10103372 10103372 PRJNA682774_P_NODE_5268_length_243_cov_0.917647_g5239_i0 PRJNA682774 5268 243 0.917647 2.22988221 Fungi 4751 Fungi Fungi 52.8 0.022   NTclustered gi|2295516020|gb|MZ014561.1| 5323 g5239 i0 100 0.576131687242798 28 0 12 0 63 90 90066 90039 Pleurotus eryngii strain U51 pheromone receptor B1 (PR1), pheromone receptor B2 (PR2), pheromone receptor B3 (PR3), and pheromone receptor B4 (PR4) genes, complete cds blastn 140 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Pleurotus Pleurotus eryngii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;