RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA682774" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 6 ✖

bioproject 1

  • PRJNA682774 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7043330 7043330 PRJNA682774_P_NODE_4326_length_248_cov_0.891429_g4297_i0 PRJNA682774 4326 248 0.891429 2.21074392 Microcystis aeruginosa 1126 Bacteria Bacteria 436 5.3e-118   NTclustered gi|2579512724|gb|CP134413.1| 2528657 g4297 i0 98.387 20 248 4 100 0 1 248 4697482 4697729 Microcystis aeruginosa NRERC-214 chromosome, complete genome blastn 4960 436 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa
7043346 7043346 PRJNA682774_P_NODE_5446_length_242_cov_0.923077_g5417_i0 PRJNA682774 5446 242 0.923077 2.23384634 Microcystis aeruginosa 1126 Bacteria Bacteria 448 2.3799999999999995e-121   NTclustered gi|2153464463|gb|CP086723.1| 2894165 g5417 i0 100 139.223140495868 242 0 100 0 1 242 367892 367651 MAG: Microcystis aeruginosa NIBR18 chromosome, complete genome blastn 33692 448 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa
15967375 15967375 PRJNA682774_P_NODE_3993_length_250_cov_0.881356_g3964_i0 PRJNA682774 3993 250 0.881356 2.20339 Microcystis panniformis 513223 Bacteria Bacteria 462 8.83e-126   NTclustered gi|914397586|gb|CP011339.1| 1638788 g3964 i0 100 35.54 250 0 100 0 1 250 4398187 4398436 Microcystis panniformis FACHB-1757, complete genome blastn 8885 462 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis panniformis
19026451 19026451 PRJNA682774_P_NODE_4615_length_246_cov_0.901734_g4586_i0 PRJNA682774 4615 246 0.901734 2.21826564 Microcystis 1125 Bacteria Bacteria 455 1.4500000000000002e-123   NTclustered gi|1805636340|gb|CP046058.1| 449468 g4586 i0 100 4.66260162601626 246 0 100 0 1 246 4113139 4113384 Microcystis aeruginosa NIES-298 chromosome, complete genome blastn 1147 455 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa
24890803 24890803 PRJNA682774_P_NODE_3520_length_253_cov_0.866667_g3491_i0 PRJNA682774 3520 253 0.866667 2.19266751 Microcystis panniformis 513223 Bacteria Bacteria 468 1.92e-127   NTclustered gi|914397586|gb|CP011339.1| 1638788 g3491 i0 100 20.0632411067194 253 0 100 0 1 253 5068699 5068951 Microcystis panniformis FACHB-1757, complete genome blastn 5076 468 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis panniformis
24890808 24890808 PRJNA682774_P_NODE_3860_length_251_cov_0.876404_g3831_i0 PRJNA682774 3860 251 0.876404 2.19977404 Microcystis aeruginosa 1126 Bacteria Bacteria 436 5.369999999999999e-118   NTclustered gi|2153464463|gb|CP086723.1| 2894165 g3831 i0 98.008 2064.30278884462 251 5 100 0 1 251 1516291 1516541 MAG: Microcystis aeruginosa NIBR18 chromosome, complete genome blastn 518140 436 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcales Microcystaceae Microcystis Microcystis aeruginosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;