RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA682370" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA682370 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
664198 664198 PRJNA682370_S_NODE_14201_length_190_cov_2.109677_g13589_i0 PRJNA682370 14201 190 2.109677 4.0083863 Stygiolobus caldivivus 2824673 Archaea Archaea 52.8 0.016   NTclustered gi|2051082101|dbj|AP024597.1| 2824673 g13589 i0 100 0.147368421052632 28 0 15 0 4 31 2473236 2473209 Stygiolobus sp. KN-1 DNA, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Stygiolobus Stygiolobus caldivivus
4492213 4492213 PRJNA682370_S_NODE_19244_length_164_cov_2.441860_g18632_i0 PRJNA682370 19244 164 2.44186 4.0046504 Acidianus sulfidivorans 312539 Archaea Archaea 56.5 0.001   NTclustered gi|1820310478|gb|CP029288.2| 619593 g18632 i0 96.97 0.201219512195122 33 1 20 0 124 156 707439 707471 Acidianus sulfidivorans JP7 chromosome, complete genome blastn 33 56.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus sulfidivorans
22341845 22341845 PRJNA682370_S_NODE_7418_length_279_cov_1.840164_g6806_i0 PRJNA682370 7418 279 1.840164 5.13405756 Methanocaldococcus fervens 83171 Archaea Archaea 54.7 0.007   NTclustered gi|256793173|gb|CP001696.1| 573064 g6806 i0 100 0.103942652329749 29 0 10 0 88 116 1282616 1282644 Methanocaldococcus fervens AG86, complete genome blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus fervens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;