RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA682370" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA682370 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3215003 3215003 PRJNA682370_S_NODE_15043_length_184_cov_3.677852_g14431_i0 PRJNA682370 15043 184 3.677852 6.76724768 Cokeromyces recurvatus 90255 Fungi Fungi 115 1.97e-21   NTclustered gi|2324087489|ref|XM_051530053.1| 90255 g14431 i0 79.878 2.60869565217391 164 27 88 5 20 180 261 421 Cokeromyces recurvatus rab11 protein (BX663DRAFT_527546), mRNA blastn 480 115 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
4492075 4492075 PRJNA682370_S_NODE_11864_length_210_cov_1.502857_g11252_i0 PRJNA682370 11864 210 1.502857 3.1559997 Rhizopus delemar 936053 Fungi Fungi 154 4.9100000000000005e-33   NTclustered gi|2797465563|ref|XM_067662873.1| 246409 g11252 i0 79.904 12.052380952381 209 42 99 0 2 210 365 157 Rhizopus delemar RA 99-880 40S ribosomal protein uS4 (RO3G_08283), partial mRNA blastn 2531 154 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
10868248 10868248 PRJNA682370_S_NODE_17329_length_172_cov_1.656934_g16717_i0 PRJNA682370 17329 172 1.656934 2.84992648 Mycotypha africana 64632 Fungi Fungi 115 1.81e-21   NTclustered gi|2432570701|ref|XM_053083359.1| 64632 g16717 i0 85.586 1.63372093023256 111 15 64 1 6 115 1287 1397 Mycotypha africana V-type proton ATPase catalytic subunit A (BDF20DRAFT_907251), partial mRNA blastn 281 115 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
17242337 17242337 PRJNA682370_S_NODE_3094_length_469_cov_4.658986_g2490_i0 PRJNA682370 3094 469 4.658986 21.85064434 Rhizopus microsporus 58291 Fungi Fungi 250 1.51e-61   NTclustered gi|1331189772|ref|XM_023607192.1| 1340429 g2490 i0 87.5 35.8528784648188 216 27 46 0 1 216 196 411 Rhizopus microsporus ATCC 52813 uncharacterized protein (RHIMIDRAFT_211203), mRNA blastn 16815 250 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;