RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA682078 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3211183 3211183 PRJNA682078_P_NODE_21283_length_740_cov_1.430285_g19668_i0 PRJNA682078 21283 740 1.430285 10.584109 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 571 4.6e-158   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g19668 i0 81.06 133.977027027027 755 110 100 31 4 740 5033180 5032441 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 99143 571 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
12137096 12137096 PRJNA682078_P_NODE_105170_length_344_cov_1.420664_g103393_i0 PRJNA682078 105170 344 1.420664 4.88708416 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 475 1.63e-129   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g103393 i0 91.594 635.997093023256 345 27 100 2 1 344 5033481 5033824 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 218783 475 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
24885827 24885827 PRJNA682078_P_NODE_184420_length_272_cov_1.487437_g182643_i0 PRJNA682078 184420 272 1.487437 4.04582864 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 387 6.02e-103   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g182643 i0 92.308 93.2352941176471 273 19 99 1 2 272 5032749 5032477 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 25360 387 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;