contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4488992 | 4488992 | PRJNA682078_P_NODE_241684_length_248_cov_0.880000_g239907_i0 | PRJNA682078 | 241684 | 248 | 0.88 | 2.1824 | Congregicoccus parvus | 3081749 | Bacteria | Bacteria | 353 | 5.49e-93 | NTclustered | gi|2599616993|dbj|AP028972.1| | 3081749 | g239907 | i0 | 92.653 | 0.987903225806452 | 245 | 18 | 99 | 0 | 4 | 248 | 2927013 | 2926769 | Opitutales bacterium ASA1 DNA, complete genome | blastn | 245 | 353 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Alterococcaceae | Congregicoccus | Congregicoccus parvus | |
| 7039438 | 7039438 | PRJNA682078_P_NODE_232066_length_250_cov_0.870056_g230289_i0 | PRJNA682078 | 232066 | 250 | 0.870056 | 2.17514 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1554474302|gb|CP025823.1| | 239935 | g230289 | i0 | 100 | 99.904 | 250 | 0 | 100 | 0 | 1 | 250 | 623488 | 623239 | Akkermansia muciniphila strain EB-AMDK-7 chromosome, complete genome | blastn | 24976 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 7039703 | 7039703 | PRJNA682078_P_NODE_243606_length_248_cov_0.880000_g241829_i0 | PRJNA682078 | 243606 | 248 | 0.88 | 2.1824 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 453 | 5.2600000000000005e-123 | NTclustered | gi|1805960388|gb|CP029703.1| | 239935 | g241829 | i0 | 99.597 | 95 | 248 | 1 | 100 | 0 | 1 | 248 | 1570731 | 1570978 | Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome | blastn | 23560 | 453 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 7040107 | 7040107 | PRJNA682078_P_NODE_259526_length_246_cov_0.861272_g257749_i0 | PRJNA682078 | 259526 | 246 | 0.861272 | 2.11872912 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 401 | 1.9199999999999992e-107 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g257749 | i0 | 98.678 | 265.560975609756 | 227 | 2 | 92 | 1 | 21 | 246 | 855 | 629 | Luteolibacter sp. SL250 chromosome | blastn | 65328 | 401 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 7042196 | 7042196 | PRJNA682078_P_NODE_75326_length_399_cov_0.944785_g73551_i0 | PRJNA682078 | 75326 | 399 | 0.944785 | 3.76969215 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 521 | 2.4199999999999995e-143 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g73551 | i0 | 90.226 | 97.8345864661654 | 399 | 39 | 100 | 0 | 1 | 399 | 3831673 | 3831275 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 39036 | 521 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 8314308 | 8314308 | PRJNA682078_P_NODE_243347_length_248_cov_0.880000_g241570_i0 | PRJNA682078 | 243347 | 248 | 0.88 | 2.1824 | Methylacidimicrobium sp. B4 | 2796139 | Bacteria | Bacteria | 176 | 1.28e-39 | NTclustered | gi|1999103383|gb|CP066203.1| | 2796139 | g241570 | i0 | 80.435 | 5.11290322580645 | 230 | 45 | 93 | 0 | 1 | 230 | 977050 | 976821 | Methylacidimicrobium sp. B4 chromosome, complete genome | blastn | 1268 | 176 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidimicrobium | Methylacidimicrobium sp. B4 | ||||
| 10866964 | 10866964 | PRJNA682078_P_NODE_5029_length_1667_cov_6.696989_g4105_i0 | PRJNA682078 | 5029 | 1667 | 6.696989 | 111.63880663 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 1635 | 0 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g4105 | i0 | 84.561 | 217.271145770846 | 1684 | 223 | 99 | 33 | 8 | 1667 | 26965 | 28635 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 362191 | 1635 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 12142638 | 12142638 | PRJNA682078_P_NODE_63210_length_432_cov_10.707521_g61435_i0 | PRJNA682078 | 63210 | 432 | 10.707521 | 46.25649072 | Spartobacteria bacterium Gsoil 144 | 363895 | Bacteria | Bacteria | 684 | 0 | NTclustered | gi|84453017|dbj|AB245342.1| | 363895 | g61435 | i0 | 98.21 | 89.3425925925926 | 391 | 7 | 91 | 0 | 1 | 391 | 391 | 1 | Spartobacteria bacterium Gsoil 144 gene for 16S rRNA, partial sequence | blastn | 38596 | 684 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Spartobacteria bacterium Gsoil 144 | ||||
| 14687084 | 14687084 | PRJNA682078_P_NODE_119672_length_326_cov_0.901186_g117895_i0 | PRJNA682078 | 119672 | 326 | 0.901186 | 2.93786636 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 592 | 1.4599999999999996e-164 | NTclustered | gi|2566450153|gb|CP114596.1| | 239935 | g117895 | i0 | 99.387 | 99.9846625766871 | 326 | 2 | 100 | 0 | 1 | 326 | 1738321 | 1738646 | Akkermansia muciniphila strain MmAkk2 chromosome, complete genome | blastn | 32595 | 592 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 14689901 | 14689901 | PRJNA682078_P_NODE_234812_length_249_cov_1.250000_g233035_i0 | PRJNA682078 | 234812 | 249 | 1.25 | 3.1125 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1805960388|gb|CP029703.1| | 239935 | g233035 | i0 | 100 | 99.9799196787149 | 249 | 0 | 100 | 0 | 1 | 249 | 223001 | 223249 | Akkermansia muciniphila strain EB-AMDK-46 chromosome, complete genome | blastn | 24895 | 460 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 14690437 | 14690437 | PRJNA682078_P_NODE_257252_length_246_cov_0.890173_g255475_i0 | PRJNA682078 | 257252 | 246 | 0.890173 | 2.18982558 | Oleiharenicola sp. Vm1 | 3398393 | Bacteria | Bacteria | 178 | 3.5099999999999993e-40 | NTclustered | gi|2912653302|gb|CP180537.1| | 3398393 | g255475 | i0 | 83.333 | 0.91869918699187 | 198 | 28 | 80 | 5 | 51 | 246 | 3427523 | 3427329 | Oleiharenicola sp. Vm1 chromosome, complete genome | blastn | 226 | 178 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Oleiharenicola | Oleiharenicola sp. Vm1 | |
| 15201516 | 15201516 | PRJNA682078_P_NODE_222132_length_251_cov_0.865169_g220355_i0 | PRJNA682078 | 222132 | 251 | 0.865169 | 2.17157419 | Akkermansia | 239934 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1805906055|gb|CP027004.1| | 239935 | g220355 | i0 | 100 | 99.9362549800797 | 251 | 0 | 100 | 0 | 1 | 251 | 1150004 | 1150254 | Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome | blastn | 25084 | 464 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 15201848 | 15201848 | PRJNA682078_P_NODE_256772_length_246_cov_0.890173_g254995_i0 | PRJNA682078 | 256772 | 246 | 0.890173 | 2.18982558 | Akkermansia | 239934 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|1510319856|gb|CP024740.1| | 239935 | g254995 | i0 | 100 | 100 | 246 | 0 | 100 | 0 | 1 | 246 | 374220 | 373975 | Akkermansia muciniphila strain EB-AMDK-4 chromosome, complete genome | blastn | 24600 | 455 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 18511876 | 18511876 | PRJNA682078_P_NODE_191495_length_268_cov_1.251282_g189718_i0 | PRJNA682078 | 191495 | 268 | 1.251282 | 3.35343576 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 228 | 3.8e-55 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g189718 | i0 | 82.022 | 72.2350746268657 | 267 | 48 | 99 | 0 | 2 | 268 | 5868964 | 5869230 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 19359 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 18512813 | 18512813 | PRJNA682078_P_NODE_228075_length_250_cov_1.305085_g226298_i0 | PRJNA682078 | 228075 | 250 | 1.305085 | 3.2627125 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 446 | 8.89e-121 | NTclustered | gi|1173526690|gb|CP015409.2| | 239935 | g226298 | i0 | 98.8 | 94.236 | 250 | 3 | 100 | 0 | 1 | 250 | 366443 | 366194 | Akkermansia muciniphila strain YL44, complete genome | blastn | 23559 | 446 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 19788440 | 19788440 | PRJNA682078_P_NODE_258216_length_246_cov_0.890173_g256439_i0 | PRJNA682078 | 258216 | 246 | 0.890173 | 2.18982558 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 239 | 1.59e-58 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g256439 | i0 | 85.281 | 1.63008130081301 | 231 | 34 | 94 | 0 | 10 | 240 | 373773 | 374003 | Luteolibacter sp. SL250 chromosome | blastn | 401 | 239 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 19788559 | 19788559 | PRJNA682078_P_NODE_262636_length_245_cov_0.895349_g260859_i0 | PRJNA682078 | 262636 | 245 | 0.895349 | 2.19360505 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 436 | 5.229999999999999e-118 | NTclustered | gi|1805906055|gb|CP027004.1| | 239935 | g260859 | i0 | 98.776 | 99.9183673469388 | 245 | 3 | 100 | 0 | 1 | 245 | 1542208 | 1541964 | Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome | blastn | 24480 | 436 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 20299274 | 20299274 | PRJNA682078_P_NODE_221856_length_251_cov_1.196629_g220079_i0 | PRJNA682078 | 221856 | 251 | 1.196629 | 3.00353879 | PVC group | 1783257 | Bacteria | Bacteria | 71.3 | 6.28e-8 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g220079 | i0 | 97.561 | 14.800796812749 | 41 | 1 | 16 | 0 | 211 | 251 | 700804 | 700844 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 3715 | 71.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21061925 | 21061925 | PRJNA682078_P_NODE_175797_length_277_cov_1.509804_g174020_i0 | PRJNA682078 | 175797 | 277 | 1.509804 | 4.18215708 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 448 | 2.7799999999999996e-121 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g174020 | i0 | 96.667 | 11.3862815884477 | 270 | 7 | 97 | 2 | 9 | 277 | 4489523 | 4489255 | Luteolibacter sp. SL250 chromosome | blastn | 3154 | 448 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 21063358 | 21063358 | PRJNA682078_P_NODE_232157_length_250_cov_0.870056_g230380_i0 | PRJNA682078 | 232157 | 250 | 0.870056 | 2.17514 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 457 | 4.1099999999999985e-124 | NTclustered | gi|2566450153|gb|CP114596.1| | 239935 | g230380 | i0 | 100 | 98.692 | 247 | 0 | 99 | 0 | 1 | 247 | 1754826 | 1755072 | Akkermansia muciniphila strain MmAkk2 chromosome, complete genome | blastn | 24673 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 21064895 | 21064895 | PRJNA682078_P_NODE_294197_length_237_cov_2.817073_g292420_i0 | PRJNA682078 | 294197 | 237 | 2.817073 | 6.67646301 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 217 | 7.129999999999999e-52 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g292420 | i0 | 84.545 | 90.9409282700422 | 220 | 32 | 92 | 2 | 19 | 237 | 1315184 | 1314966 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 21553 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21065549 | 21065549 | PRJNA682078_P_NODE_54917_length_462_cov_7.989717_g53146_i0 | PRJNA682078 | 54917 | 462 | 7.989717 | 36.91249254 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 730 | 0 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g53146 | i0 | 95.228 | 194.528138528139 | 461 | 22 | 99 | 0 | 2 | 462 | 2748248 | 2748708 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 89872 | 730 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21575202 | 21575202 | PRJNA682078_P_NODE_230737_length_250_cov_0.870056_g228960_i0 | PRJNA682078 | 230737 | 250 | 0.870056 | 2.17514 | Akkermansia | 239934 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1510319856|gb|CP024740.1| | 239935 | g228960 | i0 | 100 | 99.836 | 250 | 0 | 100 | 0 | 1 | 250 | 2145536 | 2145785 | Akkermansia muciniphila strain EB-AMDK-4 chromosome, complete genome | blastn | 24959 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 22850836 | 22850836 | PRJNA682078_P_NODE_277838_length_243_cov_0.905882_g276061_i0 | PRJNA682078 | 277838 | 243 | 0.905882 | 2.20129326 | Akkermansia | 239934 | Bacteria | Bacteria | 449 | 6.65e-122 | NTclustered | gi|1173526690|gb|CP015409.2| | 239935 | g276061 | i0 | 100 | 99.9917695473251 | 243 | 0 | 100 | 0 | 1 | 243 | 907210 | 907452 | Akkermansia muciniphila strain YL44, complete genome | blastn | 24298 | 449 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 24125410 | 24125410 | PRJNA682078_P_NODE_284039_length_242_cov_0.911243_g282262_i0 | PRJNA682078 | 284039 | 242 | 0.911243 | 2.20520806 | Akkermansia | 239934 | Bacteria | Bacteria | 442 | 1.1099999999999995e-119 | NTclustered | gi|1554502134|gb|CP025835.1| | 239935 | g282262 | i0 | 99.587 | 96 | 242 | 1 | 100 | 0 | 1 | 242 | 981393 | 981152 | Akkermansia muciniphila strain EB-AMDK-20 chromosome, complete genome | blastn | 23232 | 442 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;