RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA682078 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
661163 661163 PRJNA682078_P_NODE_246921_length_247_cov_1.758621_g245144_i0 PRJNA682078 246921 247 1.758621 4.34379387 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 80.5 1.02e-10   NTclustered gi|1002450428|ref|XM_015801042.1| 157538 g245144 i0 87.324 0.287449392712551 71 7 28 2 65 134 716 647 Leptomonas pyrrhocoris putative mitochondrial dihydrolipoamide acetyltransferase precursor mRNA blastn 71 80.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
8827216 8827216 PRJNA682078_P_NODE_82707_length_382_cov_1.644013_g80932_i0 PRJNA682078 82707 382 1.644013 6.28012966 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 540 6.38e-149   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g80932 i0 92.01 148.552356020942 388 25 100 6 1 382 4393 4780 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 56747 540 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
14691313 14691313 PRJNA682078_P_NODE_293272_length_240_cov_2.341317_g291495_i0 PRJNA682078 293272 240 2.341317 5.6191608 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 159 1.24e-34   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g291495 i0 79.051 85.3625 253 37 100 13 1 240 6131 5882 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 20487 159 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
17237480 17237480 PRJNA682078_P_NODE_178134_length_276_cov_1.137931_g176357_i0 PRJNA682078 178134 276 1.137931 3.14068956 Neobodo designis 312471 Euglenozoa other_Eukaryota 488 1.6299999999999995e-133   NTclustered gi|225216795|gb|FJ176710.1| 312471 g176357 i0 98.551 145.728260869565 276 4 100 0 1 276 691 966 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 40221 488 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;