contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3210566 | 3210566 | PRJNA682078_P_NODE_187943_length_270_cov_1.385787_g186166_i0 | PRJNA682078 | 187943 | 270 | 1.385787 | 3.7416249 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 241 | 4.92e-59 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g186166 | i0 | 83.588 | 2.91481481481481 | 262 | 37 | 96 | 4 | 11 | 269 | 1360028 | 1360286 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 787 | 241 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 4489297 | 4489297 | PRJNA682078_P_NODE_254524_length_246_cov_1.300578_g252747_i0 | PRJNA682078 | 254524 | 246 | 1.300578 | 3.19942188 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 302 | 2e-77 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g252747 | i0 | 89.256 | 1.97967479674797 | 242 | 24 | 98 | 2 | 6 | 246 | 3794109 | 3793869 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 487 | 302 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 5761664 | 5761664 | PRJNA682078_P_NODE_121465_length_323_cov_4.076000_g119688_i0 | PRJNA682078 | 121465 | 323 | 4.076 | 13.16548 | uncultured Bdellovibrio sp. | 239744 | Bacteria | Bacteria | 584 | 2.419999999999999e-162 | NTclustered | gi|354780212|gb|JN412381.1| | 239744 | g119688 | i0 | 99.381 | 114.835913312693 | 323 | 1 | 100 | 1 | 1 | 323 | 20 | 341 | Uncultured Bdellovibrio sp. clone PM62 16S ribosomal RNA gene, partial sequence | blastn | 37092 | 584 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | uncultured Bdellovibrio sp. | ||
| 5765417 | 5765417 | PRJNA682078_P_NODE_271265_length_244_cov_0.900585_g269488_i0 | PRJNA682078 | 271265 | 244 | 0.900585 | 2.1974274 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 322 | 1.52e-83 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g269488 | i0 | 91.139 | 2.91803278688525 | 237 | 21 | 97 | 0 | 8 | 244 | 3055887 | 3055651 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 712 | 322 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 6277405 | 6277405 | PRJNA682078_P_NODE_282025_length_242_cov_0.911243_g280248_i0 | PRJNA682078 | 282025 | 242 | 0.911243 | 2.20520806 | Bacteriovorax | 146784 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g280248 | i0 | 100 | 10.5537190082645 | 242 | 0 | 100 | 0 | 1 | 242 | 1661712 | 1661953 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 2554 | 448 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 7038950 | 7038950 | PRJNA682078_P_NODE_213086_length_255_cov_2.510989_g211309_i0 | PRJNA682078 | 213086 | 255 | 2.510989 | 6.40302195 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 211 | 3.61e-50 | NTclustered | gi|347589306|gb|CP002382.1| | 856793 | g211309 | i0 | 82.305 | 15.2078431372549 | 243 | 43 | 95 | 0 | 1 | 243 | 1584346 | 1584104 | Micavibrio aeruginosavorus ARL-13, complete genome | blastn | 3878 | 211 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 7550753 | 7550753 | PRJNA682078_P_NODE_214166_length_255_cov_1.291209_g212389_i0 | PRJNA682078 | 214166 | 255 | 1.291209 | 3.29258295 | Bdellovibrio | 958 | Bacteria | Bacteria | 451 | 1.95e-122 | NTclustered | gi|2663425168|dbj|AP029173.1| | 3113893 | g212389 | i0 | 98.814 | 16.1803921568627 | 253 | 3 | 99 | 0 | 3 | 255 | 2943861 | 2943609 | Bdellovibrio sp. CKG001 DNA, complete genome | blastn | 4126 | 455 | 0.991208791208791 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. CKG001 | ||
| 7552071 | 7552071 | PRJNA682078_P_NODE_71666_length_408_cov_1.847761_g69891_i0 | PRJNA682078 | 71666 | 408 | 1.847761 | 7.53886488 | Bdellovibrio | 958 | Bacteria | Bacteria | 726 | 0 | NTclustered | gi|1210342126|gb|CP020946.1| | 959 | g69891 | i0 | 98.775 | 205.561274509804 | 408 | 5 | 100 | 0 | 1 | 408 | 2948434 | 2948027 | Bdellovibrio bacteriovorus strain SSB218315, complete genome | blastn | 83869 | 726 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 8313995 | 8313995 | PRJNA682078_P_NODE_231587_length_250_cov_0.870056_g229810_i0 | PRJNA682078 | 231587 | 250 | 0.870056 | 2.17514 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 213 | 9.81e-51 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g229810 | i0 | 82.8 | 2.008 | 250 | 31 | 99 | 7 | 4 | 250 | 3691891 | 3691651 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 502 | 213 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 8315065 | 8315065 | PRJNA682078_P_NODE_274447_length_243_cov_1.270588_g272670_i0 | PRJNA682078 | 274447 | 243 | 1.270588 | 3.08752884 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 287 | 5.52e-73 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g272670 | i0 | 88.285 | 35.40329218107 | 239 | 28 | 98 | 0 | 4 | 242 | 1854516 | 1854278 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 8603 | 287 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 10863440 | 10863440 | PRJNA682078_P_NODE_175909_length_277_cov_1.441176_g174132_i0 | PRJNA682078 | 175909 | 277 | 1.441176 | 3.99205752 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 303 | 6.37e-78 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g174132 | i0 | 87.266 | 1.92779783393502 | 267 | 33 | 96 | 1 | 12 | 277 | 2715853 | 2715587 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 534 | 303 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 12140363 | 12140363 | PRJNA682078_P_NODE_238070_length_249_cov_0.875000_g236293_i0 | PRJNA682078 | 238070 | 249 | 0.875 | 2.17875 | Bacteriovorax sp. HI3 | 2984118 | Bacteria | Bacteria | 267 | 7.39e-67 | NTclustered | gi|2321225508|dbj|AP026946.1| | 2984118 | g236293 | i0 | 86.179 | 1.88755020080321 | 246 | 34 | 99 | 0 | 3 | 248 | 598477 | 598722 | Bacteriovorax sp. HI3 DNA, complete genome | blastn | 470 | 267 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax sp. HI3 | ||
| 13415331 | 13415331 | PRJNA682078_P_NODE_25391_length_677_cov_2.269868_g23680_i0 | PRJNA682078 | 25391 | 677 | 2.269868 | 15.36700636 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 531 | 7.109999999999999e-146 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g23680 | i0 | 81.791 | 301.096011816839 | 659 | 97 | 96 | 20 | 31 | 677 | 3251792 | 3251145 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 203842 | 531 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 15961831 | 15961831 | PRJNA682078_P_NODE_160553_length_287_cov_0.995327_g158776_i0 | PRJNA682078 | 160553 | 287 | 0.995327 | 2.85658849 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 503 | 6.1e-138 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g158776 | i0 | 98.258 | 134.177700348432 | 287 | 5 | 100 | 0 | 1 | 287 | 512689 | 512975 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 38509 | 503 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 15963642 | 15963642 | PRJNA682078_P_NODE_233593_length_249_cov_1.818182_g231816_i0 | PRJNA682078 | 233593 | 249 | 1.818182 | 4.52727318 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 309 | 1.21e-79 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g231816 | i0 | 89.669 | 2.93975903614458 | 242 | 25 | 97 | 0 | 8 | 249 | 1168414 | 1168655 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 732 | 309 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 18513516 | 18513516 | PRJNA682078_P_NODE_257035_length_246_cov_0.890173_g255258_i0 | PRJNA682078 | 257035 | 246 | 0.890173 | 2.18982558 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 195 | 3.49e-45 | NTclustered | gi|1326041851|gb|CP025704.1| | 960 | g255258 | i0 | 94.444 | 0.51219512195122 | 126 | 7 | 51 | 0 | 8 | 133 | 1544939 | 1545064 | Bacteriovorax stolpii strain DSM 12778 chromosome, complete genome | blastn | 126 | 195 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 23613188 | 23613188 | PRJNA682078_P_NODE_211419_length_256_cov_2.153005_g209642_i0 | PRJNA682078 | 211419 | 256 | 2.153005 | 5.5116928 | Bdellovibrio sp. HCB288 | 3394355 | Bacteria | Bacteria | 226 | 1.3e-54 | NTclustered | gi|2895994964|gb|CP178619.1| | 3394355 | g209642 | i0 | 82.677 | 4.8203125 | 254 | 44 | 99 | 0 | 3 | 256 | 2916740 | 2916487 | Bdellovibrio sp. HCB288 chromosome, complete genome | blastn | 1234 | 226 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB288 | ||
| 24886690 | 24886690 | PRJNA682078_P_NODE_221280_length_251_cov_1.460674_g219503_i0 | PRJNA682078 | 221280 | 251 | 1.460674 | 3.66629174 | Bdellovibrio sp. HCB-162 | 3394234 | Bacteria | Bacteria | 222 | 1.64e-53 | NTclustered | gi|2898207634|gb|CP178861.1| | 3394234 | g219503 | i0 | 83.613 | 0.948207171314741 | 238 | 37 | 94 | 2 | 15 | 251 | 936232 | 936468 | Bdellovibrio sp. HCB-162 chromosome, complete genome | blastn | 238 | 222 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB-162 | ||
| 24887386 | 24887386 | PRJNA682078_P_NODE_249420_length_247_cov_0.885057_g247643_i0 | PRJNA682078 | 249420 | 247 | 0.885057 | 2.18609079 | Bacteriovorax stolpii | 960 | Bacteria | Bacteria | 230 | 9.61e-56 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g247643 | i0 | 83.401 | 2 | 247 | 41 | 100 | 0 | 1 | 247 | 2749909 | 2750155 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 494 | 230 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;