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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Methanobacteriati · 10 ✖

bioproject 1

  • PRJNA682078 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3212824 3212824 PRJNA682078_P_NODE_279663_length_242_cov_2.621302_g277886_i0 PRJNA682078 279663 242 2.621302 6.34355084 Haloquadratum walsbyi 293091 Archaea Archaea 261 3.33e-65   NTclustered gi|334353260|emb|FR746099.1| 768065 g277886 i0 88.732 15.0371900826446 213 24 88 0 29 241 284065 283853 Haloquadratum walsbyi C23 complete genome blastn 3639 261 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloquadratum Haloquadratum walsbyi
3724985 3724985 PRJNA682078_P_NODE_254023_length_246_cov_1.508671_g252246_i0 PRJNA682078 254023 246 1.508671 3.71133066 root 1 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|216917|dbj|D12983.1|PYWPOL 2261 g252246 i0 100 7.95934959349593 246 0 100 0 1 246 447 692 Pyrococcus furiosus pol gene for DNA polymerase, complete cds blastn 1958 455 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
6278194 6278194 PRJNA682078_P_NODE_73105_length_404_cov_2.211480_g71330_i0 PRJNA682078 73105 404 2.21148 8.9343792 root 1 Root_unresolved Root_unresolved 747 0   NTclustered gi|216917|dbj|D12983.1|PYWPOL 2261 g71330 i0 100 6 404 0 100 0 1 404 1606 1203 Pyrococcus furiosus pol gene for DNA polymerase, complete cds blastn 2424 747 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
7552423 7552423 PRJNA682078_P_NODE_97526_length_355_cov_2.081560_g95750_i0 PRJNA682078 97526 355 2.08156 7.389538 root 1 Root_unresolved Root_unresolved 645 1.2099999999999996e-180   NTclustered gi|436492|gb|U00707.1|PSU00707 33866 g95750 i0 99.437 11.6901408450704 355 2 100 0 1 355 1120 766 Pyrococcus sp. Deep Vent DNA polymerase precursor gene, complete cds blastn 4150 645 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus sp.
16475401 16475401 PRJNA682078_P_NODE_199073_length_263_cov_2.257895_g197296_i0 PRJNA682078 199073 263 2.257895 5.93826385 root 1 Root_unresolved Root_unresolved 486 5.5499999999999986e-133   NTclustered gi|216917|dbj|D12983.1|PYWPOL 2261 g197296 i0 100 6 263 0 100 0 1 263 958 696 Pyrococcus furiosus pol gene for DNA polymerase, complete cds blastn 1578 486 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
18509696 18509696 PRJNA682078_P_NODE_101355_length_349_cov_4.764493_g99579_i0 PRJNA682078 101355 349 4.764493 16.62808057 Methanobrevibacter ruminantium 83816 Archaea Archaea 56.5 0.003   NTclustered gi|288541968|gb|CP001719.1| 634498 g99579 i0 100 0.0859598853868195 30 0 9 0 285 314 1575289 1575260 Methanobrevibacter ruminantium M1, complete genome blastn 30 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter ruminantium
21060528 21060528 PRJNA682078_P_NODE_118777_length_327_cov_1.011811_g117000_i0 PRJNA682078 118777 327 1.011811 3.30862197 Halorubrum ruber 2982524 Archaea Archaea 132 3.84e-26   NTclustered gi|2031421124|gb|CP073695.1| 2982524 g117000 i0 85.714 1.02752293577982 126 16 38 2 1 125 1524454 1524330 Halorubrum ruber strain MBLA0099 chromosome, complete genome blastn 336 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ruber
21575350 21575350 PRJNA682078_P_NODE_246537_length_247_cov_2.178161_g244760_i0 PRJNA682078 246537 247 2.178161 5.38005767 Methanocella 570266 Archaea Archaea 52.8 0.022   NTclustered gi|634725790|tpe|HG985935.1| 304371 g244760 i0 94.286 0.566801619433198 35 1 14 1 5 38 44 10 TPA: Methanocella paludicola SANAE tRNA-Lys-CTT-1-1 gene blastn 140 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
21575616 21575616 PRJNA682078_P_NODE_27457_length_651_cov_2.081315_g25739_i0 PRJNA682078 27457 651 2.081315 13.54936065 root 1 Root_unresolved Root_unresolved 1203 0   NTclustered gi|216917|dbj|D12983.1|PYWPOL 2261 g25739 i0 100 6.41628264208909 651 0 100 0 1 651 1673 2323 Pyrococcus furiosus pol gene for DNA polymerase, complete cds blastn 4177 1203 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Pyrococcus Pyrococcus furiosus
23612900 23612900 PRJNA682078_P_NODE_199959_length_263_cov_1.315789_g198182_i0 PRJNA682078 199959 263 1.315789 3.46052507 Methanosarcina barkeri 2208 Archaea Archaea 315 2.77e-81   NTclustered gi|805398754|gb|CP009526.1| 1434109 g198182 i0 88.258 1.00380228136882 264 30 100 1 1 263 4349168 4348905 Methanosarcina barkeri str. Wiesmoor, complete genome blastn 264 315 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;