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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 4 ✖

bioproject 1

  • PRJNA682078 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3212824 3212824 PRJNA682078_P_NODE_279663_length_242_cov_2.621302_g277886_i0 PRJNA682078 279663 242 2.621302 6.34355084 Haloquadratum walsbyi 293091 Archaea Archaea 261 3.33e-65   NTclustered gi|334353260|emb|FR746099.1| 768065 g277886 i0 88.732 15.0371900826446 213 24 88 0 29 241 284065 283853 Haloquadratum walsbyi C23 complete genome blastn 3639 261 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloquadratum Haloquadratum walsbyi
21060528 21060528 PRJNA682078_P_NODE_118777_length_327_cov_1.011811_g117000_i0 PRJNA682078 118777 327 1.011811 3.30862197 Halorubrum ruber 2982524 Archaea Archaea 132 3.84e-26   NTclustered gi|2031421124|gb|CP073695.1| 2982524 g117000 i0 85.714 1.02752293577982 126 16 38 2 1 125 1524454 1524330 Halorubrum ruber strain MBLA0099 chromosome, complete genome blastn 336 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halorubrum Halorubrum ruber
21575350 21575350 PRJNA682078_P_NODE_246537_length_247_cov_2.178161_g244760_i0 PRJNA682078 246537 247 2.178161 5.38005767 Methanocella 570266 Archaea Archaea 52.8 0.022   NTclustered gi|634725790|tpe|HG985935.1| 304371 g244760 i0 94.286 0.566801619433198 35 1 14 1 5 38 44 10 TPA: Methanocella paludicola SANAE tRNA-Lys-CTT-1-1 gene blastn 140 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanocellales Methanocellaceae Methanocella Methanocella paludicola
23612900 23612900 PRJNA682078_P_NODE_199959_length_263_cov_1.315789_g198182_i0 PRJNA682078 199959 263 1.315789 3.46052507 Methanosarcina barkeri 2208 Archaea Archaea 315 2.77e-81   NTclustered gi|805398754|gb|CP009526.1| 1434109 g198182 i0 88.258 1.00380228136882 264 30 100 1 1 263 4349168 4348905 Methanosarcina barkeri str. Wiesmoor, complete genome blastn 264 315 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina barkeri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;