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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA682078" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 17 ✖

bioproject 1

  • PRJNA682078 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
661163 661163 PRJNA682078_P_NODE_246921_length_247_cov_1.758621_g245144_i0 PRJNA682078 246921 247 1.758621 4.34379387 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 80.5 1.02e-10   NTclustered gi|1002450428|ref|XM_015801042.1| 157538 g245144 i0 87.324 0.287449392712551 71 7 28 2 65 134 716 647 Leptomonas pyrrhocoris putative mitochondrial dihydrolipoamide acetyltransferase precursor mRNA blastn 71 80.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
661776 661776 PRJNA682078_P_NODE_2701_length_2554_cov_36.795244_g2010_i0 PRJNA682078 2701 2554 36.795244 939.75053176 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 3869 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g2010 i0 94.418 23.8406421299922 2526 126 99 12 1 2520 4546 2030 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 60889 3869 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
661904 661904 PRJNA682078_P_NODE_275161_length_243_cov_0.905882_g273384_i0 PRJNA682078 275161 243 0.905882 2.20129326 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 294 3.3e-75   NTclustered gi|2233316042|emb|OW569396.1| 166959 g273384 i0 94.737 0.781893004115226 190 9 78 1 1 189 32159 31970 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 190 294 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
6275433 6275433 PRJNA682078_P_NODE_105925_length_343_cov_1.370370_g104148_i0 PRJNA682078 105925 343 1.37037 4.7003691 Naegleria 5761 Heterolobosea other_Eukaryota 628 1.1799999999999997e-175   NTclustered gi|1434892785|gb|MH678811.1| 37103 g104148 i0 99.708 94.8075801749271 343 1 100 0 1 343 263 605 Naegleria sp. strain 1004 small subunit ribosomal RNA gene, partial sequence blastn 32519 628 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
8311941 8311941 PRJNA682078_P_NODE_151207_length_293_cov_1.945455_g149430_i0 PRJNA682078 151207 293 1.945455 5.70018315 Naegleria sp. 37103 Heterolobosea other_Eukaryota 542 1.32e-149   NTclustered gi|2651357798|gb|PP174311.1| 37103 g149430 i0 100 42.9965870307167 293 0 100 0 1 293 4090 3798 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12598 542 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
8827216 8827216 PRJNA682078_P_NODE_82707_length_382_cov_1.644013_g80932_i0 PRJNA682078 82707 382 1.644013 6.28012966 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 540 6.38e-149   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g80932 i0 92.01 148.552356020942 388 25 100 6 1 382 4393 4780 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 56747 540 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
9586379 9586379 PRJNA682078_P_NODE_114868_length_331_cov_2.379845_g113091_i0 PRJNA682078 114868 331 2.379845 7.87728695 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 556 5.42e-154   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g113091 i0 96.979 8.4773413897281 331 10 100 0 1 331 2248 1918 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2806 556 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
9592091 9592091 PRJNA682078_P_NODE_7368_length_1329_cov_4.453025_g6271_i0 PRJNA682078 7368 1329 4.453025 59.18070225 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 1037 0   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g6271 i0 85.277 43.4431903686983 1046 109 78 32 298 1329 3584 2570 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 57736 1037 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
11376041 11376041 PRJNA682078_P_NODE_181889_length_273_cov_2.730000_g180112_i0 PRJNA682078 181889 273 2.73 7.4529 Naegleria 5761 Heterolobosea other_Eukaryota 505 1.6e-138   NTclustered gi|1434892788|gb|MH678814.1| 37103 g180112 i0 100 98.8205128205128 273 0 100 0 1 273 107 379 Naegleria sp. strain 1008-fragment1 small subunit ribosomal RNA gene, partial sequence blastn 26978 505 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
13416673 13416673 PRJNA682078_P_NODE_3911_length_1945_cov_8.673077_g3090_i0 PRJNA682078 3911 1945 8.673077 168.69134765 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 3592 0   NTclustered gi|399764212|gb|JQ271723.1| 74082 g3090 i0 100 53.8622107969152 1945 0 100 0 1 1945 1971 27 Vahlkampfia avara strain 4171L 18S ribosomal RNA gene, partial sequence blastn 104762 3592 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
14691313 14691313 PRJNA682078_P_NODE_293272_length_240_cov_2.341317_g291495_i0 PRJNA682078 293272 240 2.341317 5.6191608 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 159 1.24e-34   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g291495 i0 79.051 85.3625 253 37 100 13 1 240 6131 5882 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 20487 159 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
17237480 17237480 PRJNA682078_P_NODE_178134_length_276_cov_1.137931_g176357_i0 PRJNA682078 178134 276 1.137931 3.14068956 Neobodo designis 312471 Euglenozoa other_Eukaryota 488 1.6299999999999995e-133   NTclustered gi|225216795|gb|FJ176710.1| 312471 g176357 i0 98.551 145.728260869565 276 4 100 0 1 276 691 966 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 40221 488 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
17750287 17750287 PRJNA682078_P_NODE_185714_length_271_cov_1.752525_g183937_i0 PRJNA682078 185714 271 1.752525 4.74934275 Naegleria 5761 Heterolobosea other_Eukaryota 501 2.05e-137   NTclustered gi|2651357798|gb|PP174311.1| 37103 g183937 i0 100 100.107011070111 271 0 100 0 1 271 118 388 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27129 501 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
19024493 19024493 PRJNA682078_P_NODE_206395_length_259_cov_1.655914_g204618_i0 PRJNA682078 206395 259 1.655914 4.28881726 Naegleria 5761 Heterolobosea other_Eukaryota 473 4.25e-129   NTclustered gi|2618963742|gb|OR769034.1| 5762 g204618 i0 99.614 10.1621621621622 259 1 100 0 1 259 5532 5790 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2632 473 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22335860 22335860 PRJNA682078_P_NODE_137838_length_306_cov_1.489270_g136061_i0 PRJNA682078 137838 306 1.48927 4.5571662 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 52.8 0.029   NTclustered gi|290985480|ref|XM_002675408.1| 5762 g136061 i0 100 0.0915032679738562 28 0 9 0 72 99 2062 2089 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_80324), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
22340490 22340490 PRJNA682078_P_NODE_60018_length_443_cov_3.732432_g58244_i0 PRJNA682078 60018 443 3.732432 16.53467376 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 183 1.46e-41   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g58244 i0 95.614 25.6591422121896 114 5 59 0 5 118 3866 3979 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11367 183 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
22849025 22849025 PRJNA682078_P_NODE_114198_length_332_cov_1.776062_g112421_i0 PRJNA682078 114198 332 1.776062 5.89652584 Naegleria 5761 Heterolobosea other_Eukaryota 610 4.109999999999999e-170   NTclustered gi|1434892785|gb|MH678811.1| 37103 g112421 i0 100 98.5120481927711 330 0 99 0 1 330 4 333 Naegleria sp. strain 1004 small subunit ribosomal RNA gene, partial sequence blastn 32706 610 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;