contig_metadata
55 rows where analysis = "blastn", bioproject = "PRJNA681861" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 657422 | 657422 | PRJNA681861_P_NODE_21101_length_302_cov_2.201465_g19001_i0 | PRJNA681861 | 21101 | 302 | 2.201465 | 6.6484243 | Mus musculus | 10090 | Chordata | Chordata | 510 | 3.86e-140 | NTclustered | gi|1407503532|ref|NM_001364527.1| | 10090 | g19001 | i0 | 96.689 | 99.0364238410596 | 302 | 6 | 100 | 1 | 1 | 302 | 3264 | 3561 | Mus musculus cartilage intermediate layer protein, nucleotide pyrophosphohydrolase (Cilp), transcript variant 2, mRNA | blastn | 29909 | 510 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1171332 | 1171332 | PRJNA681861_P_NODE_15981_length_391_cov_3.160221_g13894_i0 | PRJNA681861 | 15981 | 391 | 3.160221 | 12.35646411 | Mus | 10088 | Chordata | Chordata | 717 | 0 | NTclustered | gi|846387676|dbj|LC061971.1| | 10090 | g13894 | i0 | 99.744 | 100 | 391 | 1 | 100 | 0 | 1 | 391 | 1238 | 1628 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_20 | blastn | 39100 | 717 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1171334 | 1171334 | PRJNA681861_P_NODE_17681_length_356_cov_18.256881_g15583_i0 | PRJNA681861 | 17681 | 356 | 18.256881 | 64.99449636 | root | 1 | Root_unresolved | Root_unresolved | 569 | 7.519999999999996e-158 | NTclustered | gi|2904934826|gb|PQ737751.1| | 10090 | g15583 | i0 | 95.751 | 99.5589887640449 | 353 | 15 | 99 | 0 | 4 | 356 | 358 | 6 | Mus musculus lncRNA161 lncRNA, complete sequence | blastn | 35443 | 569 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1171339 | 1171339 | PRJNA681861_P_NODE_21601_length_295_cov_2.706767_g19501_i0 | PRJNA681861 | 21601 | 295 | 2.706767 | 7.98496265 | Mus | 10088 | Chordata | Chordata | 545 | 1.03e-150 | NTclustered | gi|2513288018|ref|NM_001422223.1| | 10090 | g19501 | i0 | 100 | 99.4677966101695 | 295 | 0 | 100 | 0 | 1 | 295 | 926 | 632 | Mus musculus clusterin (Clu), transcript variant 4, mRNA | blastn | 29343 | 545 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1171350 | 1171350 | PRJNA681861_P_NODE_35321_length_191_cov_1.858025_g33221_i0 | PRJNA681861 | 35321 | 191 | 1.858025 | 3.54882775 | Mus | 10088 | Chordata | Chordata | 353 | 4.02e-93 | NTclustered | gi|74139211|dbj|AK165965.1| | 10090 | g33221 | i0 | 100 | 55.455497382199 | 191 | 0 | 100 | 0 | 1 | 191 | 650 | 840 | Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730024H15 product:secreted phosphoprotein 1, full insert sequence | blastn | 10592 | 353 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1933554 | 1933554 | PRJNA681861_P_NODE_18242_length_345_cov_4.193038_g16144_i0 | PRJNA681861 | 18242 | 345 | 4.193038 | 14.4659811 | Mus musculus | 10090 | Chordata | Chordata | 634 | 2.5499999999999996e-177 | NTclustered | gi|1907070834|ref|XM_036154543.1| | 10090 | g16144 | i0 | 100 | 90.7420289855072 | 343 | 0 | 100 | 0 | 3 | 345 | 1100 | 758 | PREDICTED: Mus musculus proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) (Prg4), transcript variant X5, mRNA | blastn | 31306 | 634 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1933569 | 1933569 | PRJNA681861_P_NODE_6002_length_901_cov_3.514908_g4597_i0 | PRJNA681861 | 6002 | 901 | 3.514908 | 31.66932108 | Mus musculus | 10090 | Chordata | Chordata | 1664 | 0 | NTclustered | gi|124487394|ref|NM_001081106.1| | 10090 | g4597 | i0 | 100 | 28.0299667036626 | 901 | 0 | 100 | 0 | 1 | 901 | 24 | 924 | Mus musculus cytokine-like 1 (Cytl1), mRNA | blastn | 25255 | 1664 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2446726 | 2446726 | PRJNA681861_P_NODE_20342_length_312_cov_2.229682_g18242_i0 | PRJNA681861 | 20342 | 312 | 2.229682 | 6.95660784 | Mus | 10088 | Chordata | Chordata | 261 | 4.45e-65 | NTclustered | gi|2513288018|ref|NM_001422223.1| | 10090 | g18242 | i0 | 100 | 72.7820512820513 | 141 | 0 | 89 | 0 | 1 | 141 | 1296 | 1156 | Mus musculus clusterin (Clu), transcript variant 4, mRNA | blastn | 22708 | 261 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3208383 | 3208383 | PRJNA681861_P_NODE_2183_length_1730_cov_3.114638_g1624_i0 | PRJNA681861 | 2183 | 1730 | 3.114638 | 53.8832374 | Bos taurus | 9913 | Chordata | Chordata | 2643 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g1624 | i0 | 97.861 | 35.4826589595376 | 1543 | 5 | 96 | 4 | 1 | 1526 | 1728 | 3259 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 61385 | 2643 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 3723135 | 3723135 | PRJNA681861_P_NODE_16943_length_371_cov_1.792398_g14847_i0 | PRJNA681861 | 16943 | 371 | 1.792398 | 6.64979658 | Mus | 10088 | Chordata | Chordata | 686 | 0 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g14847 | i0 | 100 | 100 | 371 | 0 | 100 | 0 | 1 | 371 | 2208 | 1838 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 37100 | 686 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4485520 | 4485520 | PRJNA681861_P_NODE_2204_length_1721_cov_3.229314_g1624_i1 | PRJNA681861 | 2204 | 1721 | 3.229314 | 55.57649394 | Bos taurus | 9913 | Chordata | Chordata | 2699 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g1624 | i1 | 98.631 | 35.5653689715282 | 1534 | 2 | 96 | 3 | 1 | 1517 | 1728 | 3259 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 61208 | 2699 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 5761139 | 5761139 | PRJNA681861_P_NODE_10325_length_578_cov_3.568306_g7149_i2 | PRJNA681861 | 10325 | 578 | 3.568306 | 20.62480868 | Bos taurus | 9913 | Chordata | Chordata | 1057 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g7149 | i2 | 99.654 | 14.5709342560554 | 578 | 2 | 100 | 0 | 1 | 578 | 3796 | 4373 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 8422 | 1057 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 5761156 | 5761156 | PRJNA681861_P_NODE_42525_length_175_cov_2.958904_g40425_i0 | PRJNA681861 | 42525 | 175 | 2.958904 | 5.178082 | Mus musculus | 10090 | Chordata | Chordata | 324 | 2.83e-84 | NTclustered | gi|1907070834|ref|XM_036154543.1| | 10090 | g40425 | i0 | 100 | 100.434285714286 | 175 | 0 | 100 | 0 | 1 | 175 | 319 | 493 | PREDICTED: Mus musculus proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) (Prg4), transcript variant X5, mRNA | blastn | 17576 | 324 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5761158 | 5761158 | PRJNA681861_P_NODE_43065_length_172_cov_2.776224_g40965_i0 | PRJNA681861 | 43065 | 172 | 2.776224 | 4.77510528 | Mus musculus | 10090 | Chordata | Chordata | 318 | 1.2899999999999999e-82 | NTclustered | gi|2548330513|gb|OQ915115.1| | 10090 | g40965 | i0 | 100 | 82.3372093023256 | 172 | 0 | 100 | 0 | 1 | 172 | 4848 | 4677 | Mus musculus clone BAC JH_40 45S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, 3' and 5' external transcribed spacers, complete sequence; and 18S ribosomal RNA gene, partial sequence | blastn | 14162 | 318 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5761160 | 5761160 | PRJNA681861_P_NODE_45485_length_159_cov_1.415385_g43385_i0 | PRJNA681861 | 45485 | 159 | 1.415385 | 2.25046215 | Mus musculus | 10090 | Chordata | Chordata | 294 | 1.98e-75 | NTclustered | gi|160333759|ref|NM_022315.2| | 10090 | g43385 | i0 | 100 | 15.0377358490566 | 159 | 0 | 100 | 0 | 1 | 159 | 2493 | 2335 | Mus musculus SPARC related modular calcium binding 2 (Smoc2), mRNA | blastn | 2391 | 294 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5761163 | 5761163 | PRJNA681861_P_NODE_7405_length_758_cov_5.392318_g5807_i0 | PRJNA681861 | 7405 | 758 | 5.392318 | 40.87377044 | Dama dama | 30532 | Chordata | Chordata | 641 | 3.5499999999999995e-179 | NTclustered | gi|2625332933|ref|XR_009690132.1| | 30532 | g5807 | i0 | 93.897 | 834.749340369393 | 426 | 24 | 56 | 1 | 327 | 752 | 1051 | 628 | PREDICTED: Dama dama uncharacterized LOC133045119 (LOC133045119), ncRNA | blastn | 632740 | 641 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Dama | Dama dama | |
| 6275350 | 6275350 | PRJNA681861_P_NODE_30485_length_214_cov_1.545946_g28385_i0 | PRJNA681861 | 30485 | 214 | 1.545946 | 3.30832444 | Mus | 10088 | Chordata | Chordata | 396 | 7.559999999999996e-106 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g28385 | i0 | 100 | 100 | 214 | 0 | 100 | 0 | 1 | 214 | 547 | 760 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 21400 | 396 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7036120 | 7036120 | PRJNA681861_P_NODE_8986_length_653_cov_3.828526_g7149_i1 | PRJNA681861 | 8986 | 653 | 3.828526 | 25.00027478 | Bos taurus | 9913 | Chordata | Chordata | 889 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g7149 | i1 | 100 | 21.5467075038285 | 481 | 0 | 98 | 0 | 173 | 653 | 4276 | 3796 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 14070 | 889 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 7549332 | 7549332 | PRJNA681861_P_NODE_19906_length_318_cov_2.446367_g17806_i0 | PRJNA681861 | 19906 | 318 | 2.446367 | 7.77944706 | root | 1 | Root_unresolved | Root_unresolved | 586 | 6.609999999999998e-163 | NTclustered | gi|32996833|gb|AC021709.12| | 10090 | g17806 | i0 | 100 | 46.4968553459119 | 317 | 0 | 99 | 0 | 1 | 317 | 71089 | 70773 | Mus musculus chromosome 10, clone RP23-194I3, complete sequence | blastn | 14786 | 586 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8310700 | 8310700 | PRJNA681861_P_NODE_13447_length_455_cov_3.042254_g11405_i0 | PRJNA681861 | 13447 | 455 | 3.042254 | 13.8422557 | Mus musculus | 10090 | Chordata | Chordata | 767 | 0 | NTclustered | gi|53668|emb|X53929.1| | 10090 | g11405 | i0 | 96.983 | 82.3758241758242 | 464 | 0 | 99 | 1 | 2 | 451 | 1356 | 893 | M.musculus mRNA for PGII (decorin) | blastn | 37481 | 767 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8824324 | 8824324 | PRJNA681861_P_NODE_26207_length_245_cov_2.106481_g24107_i0 | PRJNA681861 | 26207 | 245 | 2.106481 | 5.16087845 | Mus | 10088 | Chordata | Chordata | 453 | 5.1900000000000006e-123 | NTclustered | gi|2513288018|ref|NM_001422223.1| | 10090 | g24107 | i0 | 100 | 99.7061224489796 | 245 | 0 | 100 | 0 | 1 | 245 | 311 | 555 | Mus musculus clusterin (Clu), transcript variant 4, mRNA | blastn | 24428 | 453 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 8824327 | 8824327 | PRJNA681861_P_NODE_29987_length_216_cov_8.919786_g27887_i0 | PRJNA681861 | 29987 | 216 | 8.919786 | 19.26673776 | Bovidae | 9895 | Chordata | Chordata | 350 | 6.04e-92 | NTclustered | gi|2587699218|ref|XM_059883597.1| | 9913 | g27887 | i0 | 97.101 | 1175.05092592593 | 207 | 6 | 96 | 0 | 1 | 207 | 1950 | 2156 | PREDICTED: Bos taurus zinc finger matrin-type 1 (ZMAT1), transcript variant X9, mRNA | blastn | 253811 | 350 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 8824336 | 8824336 | PRJNA681861_P_NODE_9947_length_595_cov_7.586572_g3307_i2 | PRJNA681861 | 9947 | 595 | 7.586572 | 45.1401034 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 1003 | 0 | NTclustered | gi|2633709601|ref|XM_061434278.1| | 9906 | g3307 | i2 | 97.297 | 1536.28907563025 | 592 | 15 | 100 | 1 | 1 | 592 | 10571 | 11161 | PREDICTED: Bos javanicus torsin family 4 member A (TOR4A), mRNA | blastn | 914092 | 1007 | 0.996027805362463 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 9586017 | 9586017 | PRJNA681861_P_NODE_16948_length_370_cov_9.020528_g14852_i0 | PRJNA681861 | 16948 | 370 | 9.020528 | 33.3759536 | Bos taurus | 9913 | Chordata | Chordata | 617 | 2.7599999999999997e-172 | NTclustered | gi|2587618129|ref|XR_009493721.1| | 9913 | g14852 | i0 | 97.507 | 172.978378378378 | 361 | 9 | 98 | 0 | 1 | 361 | 1238 | 1598 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344768), transcript variant X1, ncRNA | blastn | 64002 | 617 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 9586021 | 9586021 | PRJNA681861_P_NODE_19168_length_329_cov_36.996667_g17070_i0 | PRJNA681861 | 19168 | 329 | 36.996667 | 121.71903443 | Mus musculus | 10090 | Chordata | Chordata | 536 | 7.009999999999999e-148 | NTclustered | gi|1907070834|ref|XM_036154543.1| | 10090 | g17070 | i0 | 96.049 | 1141.61398176292 | 329 | 13 | 100 | 0 | 1 | 329 | 1817 | 1489 | PREDICTED: Mus musculus proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) (Prg4), transcript variant X5, mRNA | blastn | 375591 | 536 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 11374998 | 11374998 | PRJNA681861_P_NODE_23769_length_269_cov_2.200000_g21669_i0 | PRJNA681861 | 23769 | 269 | 2.2 | 5.918 | Mus | 10088 | Chordata | Chordata | 497 | 2.63e-136 | NTclustered | gi|1679814401|ref|XM_021176171.2| | 10089 | g21669 | i0 | 100 | 100.003717472119 | 269 | 0 | 100 | 0 | 1 | 269 | 1012 | 1280 | PREDICTED: Mus caroli secreted protein acidic and cysteine rich (Sparc), transcript variant X2, mRNA | blastn | 26901 | 497 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 11375002 | 11375002 | PRJNA681861_P_NODE_2669_length_1562_cov_28.108284_g1965_i0 | PRJNA681861 | 2669 | 1562 | 28.108284 | 439.05139608 | Bos | 9903 | Chordata | Chordata | 2483 | 0 | NTclustered | gi|2633679423|ref|XR_009735267.1| | 9906 | g1965 | i0 | 95.335 | 129.073623559539 | 1565 | 70 | 100 | 1 | 1 | 1562 | 279 | 1843 | PREDICTED: Bos javanicus uncharacterized LOC133244046 (LOC133244046), ncRNA | blastn | 201613 | 2505 | 0.991217564870259 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 12136945 | 12136945 | PRJNA681861_P_NODE_11550_length_523_cov_1.880567_g9586_i0 | PRJNA681861 | 11550 | 523 | 1.880567 | 9.83536541 | Mus musculus | 10090 | Chordata | Chordata | 966 | 0 | NTclustered | gi|187955181|gb|BC147139.1| | 10090 | g9586 | i0 | 100 | 100.108986615679 | 523 | 0 | 100 | 0 | 1 | 523 | 55 | 577 | Mus musculus C-type lectin domain family 3, member a, mRNA (cDNA clone MGC:182275 IMAGE:9056169), complete cds | blastn | 52357 | 966 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12136956 | 12136956 | PRJNA681861_P_NODE_2930_length_1481_cov_2.708678_g2145_i0 | PRJNA681861 | 2930 | 1481 | 2.708678 | 40.11552118 | Mus musculus | 10090 | Chordata | Chordata | 1454 | 0 | NTclustered | gi|78190217|gb|AC151980.3| | 10090 | g2145 | i0 | 96.932 | 7.45172180958812 | 880 | 1 | 100 | 3 | 604 | 1481 | 111321 | 110466 | Mus musculus BAC clone RP24-83M3 from chromosome 8, complete sequence | blastn | 11036 | 1454 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12136964 | 12136964 | PRJNA681861_P_NODE_47010_length_151_cov_2.147541_g44910_i0 | PRJNA681861 | 47010 | 151 | 2.147541 | 3.24278691 | Gallus gallus | 9031 | Chordata | Chordata | 279 | 5.19e-71 | NTclustered | gi|2024360878|ref|XR_005840240.1| | 9031 | g44910 | i0 | 100 | 104.953642384106 | 151 | 0 | 100 | 0 | 1 | 151 | 1090 | 1240 | PREDICTED: Gallus gallus 28S ribosomal RNA (LOC121106977), rRNA | blastn | 15848 | 279 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Galliformes | Phasianidae | Gallus | Gallus gallus | |
| 12650714 | 12650714 | PRJNA681861_P_NODE_30150_length_216_cov_1.529412_g28050_i0 | PRJNA681861 | 30150 | 216 | 1.529412 | 3.30352992 | Mus | 10088 | Chordata | Chordata | 396 | 7.6399999999999955e-106 | NTclustered | gi|12832042|dbj|AK002219.1| | 10090 | g28050 | i0 | 100 | 81.7453703703704 | 214 | 0 | 99 | 0 | 1 | 214 | 1002 | 1215 | Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610005C19 product:glutathione peroxidase 3, full insert sequence | blastn | 17657 | 396 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 12650717 | 12650717 | PRJNA681861_P_NODE_35270_length_191_cov_2.277778_g33170_i0 | PRJNA681861 | 35270 | 191 | 2.277778 | 4.35055598 | Mammalia | 40674 | Chordata | Chordata | 353 | 4.02e-93 | NTclustered | gi|29126056|dbj|AB106279.1| | 9796 | g33170 | i0 | 100 | 46.4397905759162 | 191 | 0 | 100 | 0 | 1 | 191 | 311 | 121 | Equus caballus DCN mRNA for decorin, partial cds | blastn | 8870 | 353 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Perissodactyla | Equidae | Equus | Equus caballus | |
| 13925417 | 13925417 | PRJNA681861_P_NODE_10471_length_571_cov_3.127306_g8553_i0 | PRJNA681861 | 10471 | 571 | 3.127306 | 17.85691726 | root | 1 | Root_unresolved | Root_unresolved | 1055 | 0 | NTclustered | gi|74193454|dbj|AK049805.1| | 10090 | g8553 | i0 | 100 | 83.7005253940455 | 571 | 0 | 100 | 0 | 1 | 571 | 825 | 255 | Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630001B03 product:similar to Esophageal cancer related gene 4 protein [Homo sapiens], full insert sequence | blastn | 47793 | 1055 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 13925435 | 13925435 | PRJNA681861_P_NODE_26611_length_241_cov_3.132075_g24511_i0 | PRJNA681861 | 26611 | 241 | 3.132075 | 7.54830075 | Mus | 10088 | Chordata | Chordata | 446 | 8.519999999999999e-121 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g24511 | i0 | 100 | 100.593360995851 | 241 | 0 | 100 | 0 | 1 | 241 | 1110 | 1350 | Mus musculus strain ME mitochondrion, complete genome | blastn | 24243 | 446 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14686609 | 14686609 | PRJNA681861_P_NODE_21112_length_302_cov_1.802198_g19012_i0 | PRJNA681861 | 21112 | 302 | 1.802198 | 5.44263796 | Mus musculus | 10090 | Chordata | Chordata | 398 | 3.1399999999999993e-106 | NTclustered | gi|78190217|gb|AC151980.3| | 10090 | g19012 | i0 | 100 | 5.32781456953642 | 215 | 0 | 100 | 0 | 88 | 302 | 112242 | 112456 | Mus musculus BAC clone RP24-83M3 from chromosome 8, complete sequence | blastn | 1609 | 398 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14686612 | 14686612 | PRJNA681861_P_NODE_24892_length_257_cov_2.473684_g22792_i0 | PRJNA681861 | 24892 | 257 | 2.473684 | 6.35736788 | Mus musculus | 10090 | Chordata | Chordata | 464 | 2.5299999999999998e-126 | NTclustered | gi|74204610|dbj|AK159794.1| | 10090 | g22792 | i0 | 100 | 97.7859922178988 | 251 | 0 | 98 | 0 | 1 | 251 | 838 | 588 | Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420031G03 product:fibronectin 1, full insert sequence | blastn | 25131 | 464 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 14686619 | 14686619 | PRJNA681861_P_NODE_2952_length_1474_cov_4.343253_g2160_i0 | PRJNA681861 | 2952 | 1474 | 4.343253 | 64.01954922 | Bos taurus | 9913 | Chordata | Chordata | 1991 | 0 | NTclustered | gi|2587618203|ref|XR_009493738.1| | 9913 | g2160 | i0 | 98.079 | 104.989823609227 | 1145 | 15 | 78 | 1 | 3 | 1147 | 7573 | 8710 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA | blastn | 154755 | 1991 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 15199968 | 15199968 | PRJNA681861_P_NODE_25972_length_247_cov_2.233945_g23872_i0 | PRJNA681861 | 25972 | 247 | 2.233945 | 5.51784415 | Mus | 10088 | Chordata | Chordata | 457 | 4.05e-124 | NTclustered | gi|846387786|dbj|LC061991.1| | 10090 | g23872 | i0 | 100 | 100 | 247 | 0 | 100 | 0 | 1 | 247 | 1153 | 907 | Mus musculus mitochondrion DNA, including ATP6, COX3, tRNA-Gly, ND3, tRNA-Arg, ND4L, ND4 genes, complete sequence, sequence_id: (8070..10988)_18 | blastn | 24700 | 457 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15199973 | 15199973 | PRJNA681861_P_NODE_32432_length_203_cov_1.896552_g30332_i0 | PRJNA681861 | 32432 | 203 | 1.896552 | 3.85000056 | Mus | 10088 | Chordata | Chordata | 375 | 9.24e-100 | NTclustered | gi|74180644|dbj|AK143826.1| | 10090 | g30332 | i0 | 100 | 49.4729064039409 | 203 | 0 | 100 | 0 | 1 | 203 | 72 | 274 | Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched library, clone:F430201H11 product:S100 calcium binding protein A9 (calgranulin B), full insert sequence | blastn | 10043 | 375 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15199982 | 15199982 | PRJNA681861_P_NODE_9612_length_615_cov_6.529010_g7764_i0 | PRJNA681861 | 9612 | 615 | 6.52901 | 40.1534115 | Bos | 9903 | Chordata | Chordata | 540 | 1.0699999999999999e-148 | NTclustered | gi|2633679555|ref|XR_009735293.1| | 9906 | g7764 | i0 | 99.661 | 120.528455284553 | 295 | 1 | 93 | 0 | 321 | 615 | 1071 | 777 | PREDICTED: Bos javanicus uncharacterized LOC133244066 (LOC133244066), ncRNA | blastn | 74125 | 540 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 15960283 | 15960283 | PRJNA681861_P_NODE_11313_length_533_cov_2.073413_g9357_i0 | PRJNA681861 | 11313 | 533 | 2.073413 | 11.05129129 | Mus musculus | 10090 | Chordata | Chordata | 684 | 0 | NTclustered | gi|53668|emb|X53929.1| | 10090 | g9357 | i0 | 97.311 | 77.2363977485929 | 409 | 0 | 94 | 1 | 125 | 533 | 581 | 184 | M.musculus mRNA for PGII (decorin) | blastn | 41167 | 684 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15960297 | 15960297 | PRJNA681861_P_NODE_2973_length_1467_cov_4.438108_g2160_i1 | PRJNA681861 | 2973 | 1467 | 4.438108 | 65.10704436 | Bos taurus | 9913 | Chordata | Chordata | 2047 | 0 | NTclustered | gi|2587618203|ref|XR_009493738.1| | 9913 | g2160 | i1 | 99.121 | 109.500340831629 | 1138 | 10 | 78 | 0 | 328 | 1465 | 8710 | 7573 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA | blastn | 160637 | 2047 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 15960303 | 15960303 | PRJNA681861_P_NODE_36073_length_188_cov_1.647799_g33973_i0 | PRJNA681861 | 36073 | 188 | 1.647799 | 3.09786212 | Mus musculus | 10090 | Chordata | Chordata | 348 | 1.84e-91 | NTclustered | gi|68342047|gb|AC159710.9| | 10090 | g33973 | i0 | 100 | 64.5159574468085 | 188 | 0 | 100 | 0 | 1 | 188 | 52659 | 52846 | Mus musculus 10 BAC RP24-325N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence | blastn | 12129 | 348 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 15960314 | 15960314 | PRJNA681861_P_NODE_9933_length_596_cov_3.490300_g8058_i0 | PRJNA681861 | 9933 | 596 | 3.4903 | 20.802188 | Mus musculus | 10090 | Chordata | Chordata | 1101 | 0 | NTclustered | gi|919185050|ref|NM_009976.4| | 10090 | g8058 | i0 | 100 | 74.0838926174497 | 596 | 0 | 100 | 0 | 1 | 596 | 681 | 86 | Mus musculus cystatin C (Cst3), mRNA | blastn | 44154 | 1101 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 16474158 | 16474158 | PRJNA681861_P_NODE_20213_length_313_cov_3.802817_g18113_i0 | PRJNA681861 | 20213 | 313 | 3.802817 | 11.90281721 | Bovidae | 9895 | Chordata | Chordata | 540 | 5.13e-149 | NTclustered | gi|2878495170|ref|XM_070781143.1| | 9915 | g18113 | i0 | 97.764 | 642.108626198083 | 313 | 7 | 100 | 0 | 1 | 313 | 3692 | 4004 | PREDICTED: Bos indicus leucine rich repeat containing 27 (LRRC27), transcript variant X7, mRNA | blastn | 200980 | 540 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 16474166 | 16474166 | PRJNA681861_P_NODE_26213_length_245_cov_2.055556_g24113_i0 | PRJNA681861 | 26213 | 245 | 2.055556 | 5.0361122 | Mus | 10088 | Chordata | Chordata | 453 | 5.1900000000000006e-123 | NTclustered | gi|846387586|dbj|LC061956.1| | 10090 | g24113 | i0 | 100 | 100 | 245 | 0 | 100 | 0 | 1 | 245 | 2644 | 2400 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_5 | blastn | 24500 | 453 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 17235563 | 17235563 | PRJNA681861_P_NODE_44934_length_162_cov_1.315789_g42834_i0 | PRJNA681861 | 44934 | 162 | 1.315789 | 2.13157818 | Mus musculus | 10090 | Chordata | Chordata | 300 | 4.36e-77 | NTclustered | gi|74139211|dbj|AK165965.1| | 10090 | g42834 | i0 | 100 | 51.2962962962963 | 162 | 0 | 100 | 0 | 1 | 162 | 562 | 401 | Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730024H15 product:secreted phosphoprotein 1, full insert sequence | blastn | 8310 | 300 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 18509656 | 18509656 | PRJNA681861_P_NODE_8935_length_656_cov_3.497608_g7149_i0 | PRJNA681861 | 8935 | 656 | 3.497608 | 22.94430848 | Bos taurus | 9913 | Chordata | Chordata | 889 | 0 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g7149 | i0 | 100 | 12.297256097561 | 481 | 0 | 91 | 0 | 176 | 656 | 4276 | 3796 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 8067 | 889 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 19023129 | 19023129 | PRJNA681861_P_NODE_10375_length_575_cov_7.734432_g3307_i3 | PRJNA681861 | 10375 | 575 | 7.734432 | 44.472984 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 1003 | 0 | NTclustered | gi|2633701433|ref|XR_009739310.1| | 9906 | g3307 | i3 | 98.255 | 1711.80869565217 | 573 | 10 | 99 | 0 | 1 | 573 | 1303 | 731 | PREDICTED: Bos javanicus uncharacterized LOC133256814 (LOC133256814), ncRNA | blastn | 984290 | 1011 | 0.992087042532146 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 20297746 | 20297746 | PRJNA681861_P_NODE_26116_length_246_cov_1.718894_g24016_i0 | PRJNA681861 | 26116 | 246 | 1.718894 | 4.22847924 | Mus | 10088 | Chordata | Chordata | 431 | 2.4399999999999992e-116 | NTclustered | gi|74204914|dbj|AK132030.1| | 10090 | g24016 | i0 | 100 | 75.7113821138211 | 233 | 0 | 95 | 0 | 14 | 246 | 31 | 263 | Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900001K03 product:clusterin, full insert sequence | blastn | 18625 | 431 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 22334936 | 22334936 | PRJNA681861_P_NODE_46058_length_156_cov_1.259843_g43958_i0 | PRJNA681861 | 46058 | 156 | 1.259843 | 1.96535508 | Mus musculus | 10090 | Chordata | Chordata | 289 | 9e-74 | NTclustered | gi|62123244|gb|AC152168.2| | 10090 | g43958 | i0 | 100 | 33.4102564102564 | 156 | 0 | 100 | 0 | 1 | 156 | 184968 | 185123 | Mus musculus BAC clone RP23-96H18 from chromosome 8, complete sequence | blastn | 5212 | 289 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 23610456 | 23610456 | PRJNA681861_P_NODE_11719_length_516_cov_3.262834_g9744_i0 | PRJNA681861 | 11719 | 516 | 3.262834 | 16.83622344 | Mus musculus | 10090 | Chordata | Chordata | 953 | 0 | NTclustered | gi|12837979|dbj|AK005434.1| | 10090 | g9744 | i0 | 100 | 98.953488372093 | 516 | 0 | 100 | 0 | 1 | 516 | 529 | 14 | Mus musculus adult female placenta cDNA, RIKEN full-length enriched library, clone:1600012O02 product:hemoglobin, beta adult major chain, full insert sequence | blastn | 51060 | 953 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 23610462 | 23610462 | PRJNA681861_P_NODE_15939_length_392_cov_2.008264_g13852_i0 | PRJNA681861 | 15939 | 392 | 2.008264 | 7.87239488 | Mus pahari | 10093 | Chordata | Chordata | 538 | 2.3599999999999994e-148 | NTclustered | gi|1686443775|ref|XM_029538831.1| | 10093 | g13852 | i0 | 90.244 | 99.5892857142857 | 410 | 22 | 100 | 9 | 1 | 392 | 4944 | 4535 | PREDICTED: Mus pahari fibronectin 1 (Fn1), transcript variant X3, mRNA | blastn | 39039 | 538 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus pahari | |
| 24123333 | 24123333 | PRJNA681861_P_NODE_31219_length_209_cov_9.705556_g29119_i0 | PRJNA681861 | 31219 | 209 | 9.705556 | 20.28461204 | Bos | 9903 | Chordata | Chordata | 359 | 9.64e-95 | NTclustered | gi|2878525561|ref|XM_070788954.1| | 9915 | g29119 | i0 | 98.522 | 1264.34449760766 | 203 | 3 | 97 | 0 | 5 | 207 | 2668 | 2870 | PREDICTED: Bos indicus transmembrane and coiled-coil domain family 3 (TMCC3), transcript variant X6, mRNA | blastn | 264248 | 359 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos indicus | |
| 24883735 | 24883735 | PRJNA681861_P_NODE_22560_length_283_cov_2.669291_g20460_i0 | PRJNA681861 | 22560 | 283 | 2.669291 | 7.55409353 | Mus musculus | 10090 | Chordata | Chordata | 512 | 9.97e-141 | NTclustered | gi|54168|emb|X04017.1| | 10090 | g20460 | i0 | 99.293 | 100 | 283 | 2 | 100 | 0 | 1 | 283 | 405 | 123 | Mouse mRNA for cysteine-rich glycoprotein SPARC | blastn | 28300 | 512 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;