RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA681861" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681861 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15960282 15960282 PRJNA681861_P_NODE_10893_length_551_cov_3.848659_g8947_i0 PRJNA681861 10893 551 3.848659 21.20611109 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 285 4.909999999999999e-72   NTclustered gi|2874253811|emb|OY969795.1| 464461 g8947 i0 90.783 52.7477313974592 217 15 39 4 311 525 654340 654553 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 29064 285 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
18509658 18509658 PRJNA681861_P_NODE_9835_length_601_cov_3.762238_g7965_i0 PRJNA681861 9835 601 3.762238 22.61105038 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 350 1.88e-91   NTclustered gi|2874253811|emb|OY969795.1| 464461 g7965 i0 90.672 47.4226289517471 268 18 44 6 27 291 654553 654290 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 28501 350 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
19784491 19784491 PRJNA681861_P_NODE_14276_length_432_cov_2.205955_g12212_i0 PRJNA681861 14276 432 2.205955 9.5297256 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 187 1.1e-42   NTclustered gi|2874253811|emb|OY969795.1| 464461 g12212 i0 87.425 40.5717592592593 167 16 38 5 142 305 2058887 2059051 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 17527 187 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium
19784493 19784493 PRJNA681861_P_NODE_16136_length_388_cov_2.247911_g14047_i0 PRJNA681861 16136 388 2.247911 8.72189468 uncultured Parachlamydiaceae bacterium 464461 Bacteria Bacteria 189 2.7099999999999992e-43   NTclustered gi|2874253811|emb|OY969795.1| 464461 g14047 i0 87.879 52.5618556701031 165 15 42 5 86 247 2059049 2058887 MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 blastn 20394 189 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   uncultured Parachlamydiaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;