RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681822 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1929677 1929677 PRJNA681822_P_NODE_258402_length_284_cov_2.037915_g256913_i0 PRJNA681822 258402 284 2.037915 5.7876786 Rhizomucor pusillus 4840 Fungi Fungi 117 9.17e-22   NTclustered gi|2837746490|ref|XM_069380089.1| 4840 g256913 i0 81.507 13.1971830985915 146 23 51 4 26 169 253 110 Rhizomucor pusillus 60S ribosomal protein eL8 (VTP01DRAFT_1709), partial mRNA blastn 3748 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
4483469 4483469 PRJNA681822_P_NODE_419504_length_247_cov_1.770115_g418015_i0 PRJNA681822 419504 247 1.770115 4.37218405 Umbelopsis ramanniana 41833 Fungi Fungi 200 7.529999999999999e-47   NTclustered gi|2323686361|ref|XM_051588234.1| 1314678 g418015 i0 81.526 45.2591093117409 249 40 99 6 2 247 430 185 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_236303), mRNA blastn 11179 200 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
4483705 4483705 PRJNA681822_P_NODE_438364_length_245_cov_1.790698_g436875_i0 PRJNA681822 438364 245 1.790698 4.3872101 Radiomyces spectabilis 64574 Fungi Fungi 182 2.7e-41   NTclustered gi|2323737570|ref|XM_051568896.1| 64574 g436875 i0 83.085 26.0285714285714 201 32 82 2 46 245 86 285 Radiomyces spectabilis ribosomal protein S11-domain-containing protein (BYT42DRAFT_574856), mRNA blastn 6377 182 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
5757635 5757635 PRJNA681822_P_NODE_296945_length_275_cov_1.301980_g295456_i0 PRJNA681822 296945 275 1.30198 3.580445 Lichtheimia ornata 688661 Fungi Fungi 52.8 0.025   NTclustered gi|2553589805|ref|XM_058488459.1| 688661 g295456 i0 100 0.101818181818182 28 0 10 0 95 122 260 233 Lichtheimia ornata uncharacterized protein (O0I10_008456), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
9583564 9583564 PRJNA681822_P_NODE_380768_length_251_cov_1.730337_g379279_i0 PRJNA681822 380768 251 1.730337 4.34314587 Phycomyces blakesleeanus 4837 Fungi Fungi 387 5.489999999999998e-103   NTclustered gi|918020497|ref|NC_027730.1| 4837 g379279 i0 94.422 24.0756972111554 251 14 100 0 1 251 3941 4191 Phycomyces blakesleeanus strain NRRL 1555 mitochondrion, complete genome blastn 6043 387 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
14682982 14682982 PRJNA681822_P_NODE_284032_length_278_cov_1.502439_g282543_i0 PRJNA681822 284032 278 1.502439 4.17678042 Rhizomucor pusillus 4840 Fungi Fungi 156 1.9e-33   NTclustered gi|2837726448|ref|XM_069387524.1| 4840 g282543 i0 78.629 5.05035971223022 248 43 87 8 15 257 31 273 Rhizomucor pusillus 40S ribosomal protein uS13 (VTP01DRAFT_8406), partial mRNA blastn 1404 156 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
15957781 15957781 PRJNA681822_P_NODE_379793_length_251_cov_2.387640_g378304_i0 PRJNA681822 379793 251 2.38764 5.9929764 Zychaea mexicana 64656 Fungi Fungi 150 7.84e-32   NTclustered gi|2432185357|ref|XM_053117868.1| 64656 g378304 i0 82.659 1.80478087649402 173 26 68 3 9 179 399 569 Zychaea mexicana ribosomal protein S19-domain-containing protein (BDB00DRAFT_563693), mRNA blastn 453 150 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
17232532 17232532 PRJNA681822_P_NODE_339894_length_263_cov_1.621053_g338405_i0 PRJNA681822 339894 263 1.621053 4.26336939 Lichtheimia ornata 688661 Fungi Fungi 97.1 1.09e-15   NTclustered gi|2553594463|ref|XM_058489276.1| 688661 g338405 i0 87.952 2.7376425855513302 83 8 31 2 5 86 505 586 Lichtheimia ornata 60S ribosomal protein L19-B (O0I10_009281), partial mRNA blastn 720 97.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
18508226 18508226 PRJNA681822_P_NODE_468295_length_242_cov_1.431953_g466805_i0 PRJNA681822 468295 242 1.431953 3.46532626 Rhizopus microsporus 58291 Fungi Fungi 145 3.5e-30   NTclustered gi|1331206515|ref|XM_023612140.1| 1340429 g466805 i0 78.539 21.3471074380165 219 47 90 0 1 219 283 65 Rhizopus microsporus ATCC 52813 GTPase of the Ypt/Rab family (RHIMIDRAFT_269558), mRNA blastn 5166 145 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus
19782709 19782709 PRJNA681822_P_NODE_441296_length_245_cov_0.895349_g439807_i0 PRJNA681822 441296 245 0.895349 2.19360505 Radiomyces spectabilis 64574 Fungi Fungi 257 4.37e-64   NTclustered gi|2323733479|ref|XM_051568593.1| 64574 g439807 i0 87.225 96.7510204081633 227 28 92 1 1 226 1211 985 Radiomyces spectabilis V-type proton ATPase subunit B (BYT42DRAFT_572333), mRNA blastn 23704 257 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Radiomycetaceae Radiomyces Radiomyces spectabilis
21056085 21056085 PRJNA681822_P_NODE_253757_length_285_cov_2.636792_g252268_i0 PRJNA681822 253757 285 2.636792 7.5148572 Mucor mucedo 29922 Fungi Fungi 183 8.949999999999997e-42   NTclustered gi|2324032010|ref|XM_051594527.1| 29922 g252268 i0 83.5 52.7157894736842 200 30 70 3 5 203 34 231 Mucor mucedo putative 60S ribosomal protein L27A (EV154DRAFT_236615), mRNA blastn 15024 183 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
23605739 23605739 PRJNA681822_P_NODE_204539_length_306_cov_0.961373_g203051_i0 PRJNA681822 204539 306 0.961373 2.94180138 Phycomyces blakesleeanus 4837 Fungi Fungi 185 2.7e-42   NTclustered gi|1069966156|ref|XM_018429855.1| 763407 g203051 i0 80.579 3.30392156862745 242 45 79 2 8 248 659 419 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 1011 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
23608530 23608530 PRJNA681822_P_NODE_426759_length_247_cov_0.885057_g425270_i0 PRJNA681822 426759 247 0.885057 2.18609079 Choanephora cucurbitarum 101091 Fungi Fungi 457 4.05e-124   NTclustered gi|1789425614|gb|MN897838.1| 101091 g425270 i0 100 91.5708502024292 247 0 100 0 1 247 911 665 Choanephora cucurbitarum strain CCUB1668 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22618 457 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Choanephora Choanephora cucurbitarum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;