RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681822 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4481302 4481302 PRJNA681822_P_NODE_234484_length_290_cov_1.419355_g232995_i0 PRJNA681822 234484 290 1.419355 4.1161295 Octopus bimaculoides 37653 Mollusca Mollusca 169 2.56e-37   NTclustered gi|2427298796|ref|XM_052977614.1| 37653 g232995 i0 81.951 65.2172413793104 205 31 69 5 83 282 9196 9399 PREDICTED: Octopus bimaculoides zinc finger protein 429-like (LOC128251148), transcript variant X2, mRNA blastn 18913 169 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
8309056 8309056 PRJNA681822_P_NODE_444887_length_245_cov_0.895349_g443398_i0 PRJNA681822 444887 245 0.895349 2.19360505 Octopus sinensis 2607531 Mollusca Mollusca 56.5 0.002   NTclustered gi|1914645951|ref|XM_029794245.2| 2607531 g443398 i0 96.97 0.13469387755102 33 1 13 0 60 92 422 454 PREDICTED: Octopus sinensis BAG domain-containing protein Samui-like (LOC115223595), mRNA blastn 33 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis
13410035 13410035 PRJNA681822_P_NODE_464971_length_243_cov_0.905882_g463481_i0 PRJNA681822 464971 243 0.905882 2.20129326 Bradybaena similaris 145626 Mollusca Mollusca 58.4 4.71e-4   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g463481 i0 100 32.9094650205761 31 0 14 0 26 56 77114706 77114736 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 7997 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
15958671 15958671 PRJNA681822_P_NODE_451393_length_244_cov_0.900585_g449903_i0 PRJNA681822 451393 244 0.900585 2.1974274 Magallana gigas 29159 Mollusca Mollusca 435 1.87e-117   NTclustered gi|2751319843|ref|XM_011421306.4| 29159 g449903 i0 98.77 2 244 3 100 0 1 244 362 605 PREDICTED: Magallana gigas nucleoporin Nup43 (LOC105322538), mRNA blastn 488 435 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Magallana Magallana gigas

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;