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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA681822 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1170674 1170674 PRJNA681822_P_NODE_387561_length_251_cov_0.865169_g386072_i0 PRJNA681822 387561 251 0.865169 2.17157419 Acanthamoeba 5754 Discosea other_Eukaryota 464 2.47e-126   NTclustered gi|2044079968|gb|MZ272159.1| 5756 g386072 i0 100 100.545816733068 251 0 100 0 1 251 414 164 Acanthamoeba sp. isolate AcWT29 small subunit ribosomal RNA gene, partial sequence blastn 25237 464 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
1927397 1927397 PRJNA681822_P_NODE_100962_length_390_cov_2.189274_g99477_i0 PRJNA681822 100962 390 2.189274 8.5381686 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 518 3.06e-142   NTclustered gi|562028|gb|U12386.1|ACU12386 5755 g99477 i0 90.585 18.6435897435897 393 34 100 3 1 390 803 411 Acanthamoeba castellanii mitochondrion, complete genome blastn 7271 518 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5754889 5754889 PRJNA681822_P_NODE_102325_length_388_cov_10.196825_g100840_i0 PRJNA681822 102325 388 10.196825 39.563681 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 571 2.3e-158   NTclustered gi|300078498|gb|GU001160.1| 5755 g100840 i0 93.35 37.2603092783505 391 19 100 6 1 388 7430 7816 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14457 571 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8307261 8307261 PRJNA681822_P_NODE_294087_length_276_cov_0.817734_g292598_i0 PRJNA681822 294087 276 0.817734 2.25694584 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 405 1.69e-108   NTclustered gi|33946346|gb|AY294152.1| 242541 g292598 i0 93.116 99.1485507246377 276 19 100 0 1 276 903 628 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 27365 405 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
13409589 13409589 PRJNA681822_P_NODE_433471_length_246_cov_0.890173_g431982_i0 PRJNA681822 433471 246 0.890173 2.18982558 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 230 9.56e-56   NTclustered gi|909719694|gb|KT185628.1| 5755 g431982 i0 83.806 6.19105691056911 247 34 99 5 1 244 90 333 Acanthamoeba castellanii isolate BCP-EM3VF21-1 mitochondrion, complete genome blastn 1523 230 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13410322 13410322 PRJNA681822_P_NODE_490551_length_231_cov_2.189873_g489061_i0 PRJNA681822 490551 231 2.189873 5.05860663 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 379 8.339999999999999e-101   NTclustered gi|330902855|gb|JF298253.1| 1017091 g489061 i0 96.137 50.6233766233766 233 7 100 1 1 231 1090 1322 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 11694 379 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
13410850 13410850 PRJNA681822_P_NODE_69191_length_452_cov_1.775726_g67717_i0 PRJNA681822 69191 452 1.775726 8.02628152 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 765 0   NTclustered gi|330902861|gb|JF298256.1| 1017091 g67717 i0 97.345 79.2035398230089 452 8 100 3 1 452 207 654 Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence blastn 35800 765 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
14682134 14682134 PRJNA681822_P_NODE_214972_length_299_cov_2.898230_g213484_i0 PRJNA681822 214972 299 2.89823 8.6657077 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 350 8.800000000000001e-92   NTclustered gi|1071035029|gb|KX580904.1| 5755 g213484 i0 87.919 7.20401337792642 298 34 99 2 1 297 3544 3840 Acanthamoeba castellanii strain TN mitochondrion, complete genome blastn 2154 350 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19779424 19779424 PRJNA681822_P_NODE_183796_length_318_cov_1.257143_g182308_i0 PRJNA681822 183796 318 1.257143 3.99771474 Vexillifera fluvialis 1105343 Discosea other_Eukaryota 588 1.84e-163   NTclustered gi|354720323|gb|HQ687482.1| 1105343 g182308 i0 100 66.3930817610063 318 0 100 0 1 318 863 1180 Vexillifera fluvialis strain RR1 small subunit ribosomal RNA gene, partial sequence blastn 21113 588 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera fluvialis
19783184 19783184 PRJNA681822_P_NODE_479416_length_241_cov_0.916667_g477926_i0 PRJNA681822 479416 241 0.916667 2.20916747 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 1.62e-28   NTclustered gi|470448038|ref|XM_004340073.1| 1257118 g477926 i0 88.034 4.63900414937759 117 14 49 0 110 226 109 225 Acanthamoeba castellanii str. Neff RINGbox protein 1, putative (ACA1_368020), partial mRNA blastn 1118 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23608203 23608203 PRJNA681822_P_NODE_402579_length_249_cov_0.875000_g401090_i0 PRJNA681822 402579 249 0.875 2.17875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 4.84e-4   NTclustered gi|470444690|ref|XM_004339736.1| 1257118 g401090 i0 92.683 0.164658634538153 41 1 16 1 118 156 2360 2400 Acanthamoeba castellanii str. Neff protein kinase domain containing protein (ACA1_065920), partial mRNA blastn 41 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
24882577 24882577 PRJNA681822_P_NODE_488380_length_234_cov_2.813665_g486890_i0 PRJNA681822 488380 234 2.813665 6.5839761 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 189 1.53e-43   NTclustered gi|300078498|gb|GU001160.1| 5755 g486890 i0 81.673 17.3205128205128 251 25 100 15 1 234 6215 6461 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4053 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25396454 25396454 PRJNA681822_P_NODE_169340_length_327_cov_3.807087_g167852_i0 PRJNA681822 169340 327 3.807087 12.44917449 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 588 1.8999999999999994e-163   NTclustered gi|909719646|gb|KT185626.1| 5755 g167852 i0 99.083 62.1131498470948 327 3 100 0 1 327 3923 3597 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20311 588 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;