RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA681822 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3205501 3205501 PRJNA681822_P_NODE_351303_length_260_cov_1.561497_g349814_i0 PRJNA681822 351303 260 1.561497 4.0598922 Theileria sergenti 5877 SAR_Eukaryotes SAR_Eukaryotes 75 5.06e-9   NTclustered gi|306415632|gb|HM538246.1| 5877 g349814 i0 89.655 7.8 58 6 22 0 3 60 1127 1184 Theileria sergenti clone 18 from China 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2028 75 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria sergenti
13409667 13409667 PRJNA681822_P_NODE_439711_length_245_cov_1.546512_g438222_i0 PRJNA681822 439711 245 1.546512 3.7889544 Plasmodium coatneyi 208452 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|1139863780|ref|XM_020059718.1| 208452 g438222 i0 94.118 0.138775510204082 34 2 14 0 135 168 177 144 Plasmodium coatneyi Uncharacterized protein partial mRNA blastn 34 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium coatneyi
15199233 15199233 PRJNA681822_P_NODE_359112_length_258_cov_1.248649_g357623_i0 PRJNA681822 359112 258 1.248649 3.22151442 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 132 2.9300000000000003e-26   NTclustered gi|77696462|gb|DQ211981.1| 5811 g357623 i0 82.895 5.90697674418605 152 20 58 6 108 256 1149 1001 Toxoplasma gondii 60S ribosomal subunit protein L4 (rpl4) gene, complete cds blastn 1524 132 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
19781931 19781931 PRJNA681822_P_NODE_380036_length_251_cov_2.146067_g378547_i0 PRJNA681822 380036 251 2.146067 5.38662817 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2795619416|ref|XM_068063738.1| 483139 g378547 i0 100 0.115537848605578 29 0 12 0 81 109 2694 2666 Cystoisospora suis m phase phosphoprotein mpp10 (CSUI_003542), mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
21055092 21055092 PRJNA681822_P_NODE_178217_length_322_cov_0.851406_g176729_i0 PRJNA681822 178217 322 0.851406 2.74152732 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 110 1.77e-19   NTclustered gi|160358922|gb|EU252544.1| 88456 g176729 i0 78.613 11.3975155279503 173 32 54 5 107 279 1507 1674 Cyclospora cayetanensis 28S large subunit ribosomal RNA gene, partial sequence blastn 3670 110 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
21058687 21058687 PRJNA681822_P_NODE_467757_length_242_cov_1.668639_g466267_i0 PRJNA681822 467757 242 1.668639 4.03810638 Cryptosporidium muris 5808 SAR_Eukaryotes SAR_Eukaryotes 326 1.16e-84   NTclustered gi|209883090|ref|XM_002142934.1| 441375 g466267 i0 90.909 1.23140495867769 242 22 100 0 1 242 743 502 Cryptosporidium muris RN66 uncharacterized protein (CMU_002460), partial mRNA blastn 298 326 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;