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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA681822 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12131023 12131023 PRJNA681822_P_NODE_124850_length_363_cov_1.593103_g123363_i0 PRJNA681822 124850 363 1.593103 5.78296389 Arenicola marina 6344 Annelida Annelida 139 2.57e-28   NTclustered gi|158187735|gb|EU124952.1| 6344 g123363 i0 84.397 3.95592286501377 141 22 39 0 187 327 231 371 Arenicola marina ribosomal protein rps30 mRNA, complete cds blastn 1436 139 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Arenicolidae Arenicola Arenicola marina
14683790 14683790 PRJNA681822_P_NODE_355452_length_259_cov_1.279570_g353963_i0 PRJNA681822 355452 259 1.27957 3.3140863 Hirudo verbana 311461 Annelida Annelida 52.8 0.024   NTclustered gi|2918369616|emb|OZ237781.1| 311461 g353963 i0 100 0.108108108108108 28 0 11 0 115 142 14158422 14158449 Hirudo verbana genome assembly, chromosome: 3 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
21059838 21059838 PRJNA681822_P_NODE_87157_length_412_cov_1.259587_g85676_i0 PRJNA681822 87157 412 1.259587 5.18949844 Pristina aequiseta 212339 Annelida Annelida 571 2.4599999999999998e-158   NTclustered gi|285029437|gb|GQ355455.1| 212339 g85676 i0 91.768 97.7839805825243 413 30 100 4 1 412 681 272 Pristina aequiseta 28S ribosomal RNA gene, partial sequence blastn 40287 571 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Tubificida Naididae Pristina Pristina aequiseta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;