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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 33 ✖

bioproject 1

  • PRJNA681822 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1927823 1927823 PRJNA681822_P_NODE_127562_length_361_cov_0.913194_g126075_i0 PRJNA681822 127562 361 0.913194 3.29663034 Nilaparvata lugens C virus 1577072 Viruses Viruses 662 0   NTclustered gi|726973360|gb|KM270560.1| 1577072 g126075 i0 99.723 1 361 1 100 0 1 361 8256 7896 Nilaparvata lugens C virus, complete genome blastn 361 662 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Nilaparvata lugens C virus
1932139 1932139 PRJNA681822_P_NODE_465022_length_243_cov_0.905882_g463532_i0 PRJNA681822 465022 243 0.905882 2.20129326 Spinach deltapartitivirus 1 1985163 Viruses Viruses 388 1.47e-103   NTclustered gi|1189442711|gb|KY695010.1| 1985163 g463532 i0 99.074 0.888888888888889 216 2 89 0 28 243 202 417 Spinach deltapartitivirus 1 isolate SRP059420 segment RNA2 coat protein gene, complete cds blastn 216 388 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Deltapartitivirus Spinach deltapartitivirus 1
1933373 1933373 PRJNA681822_P_NODE_9042_length_1264_cov_2.965575_g8178_i0 PRJNA681822 9042 1264 2.965575 37.484868 Zebrafish picornavirus 1 2304617 Viruses Viruses 2106 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g8178 i0 96.97 2.99604430379747 1254 38 99 0 2 1255 6558 7811 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 3787 2106 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
2445180 2445180 PRJNA681822_P_NODE_117042_length_371_cov_1.533557_g115556_i0 PRJNA681822 117042 371 1.533557 5.68949647 Orthorubulavirus 2560195 Viruses Viruses 686 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g115556 i0 100 68.4420485175202 371 0 100 0 1 371 14175 13805 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 25392 686 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
3206850 3206850 PRJNA681822_P_NODE_462783_length_243_cov_0.905882_g461293_i0 PRJNA681822 462783 243 0.905882 2.20129326 Senecavirus valles 3241303 Viruses Viruses 438 1.4399999999999996e-118   NTclustered gi|1776925995|gb|MN233020.1| 390157 g461293 i0 99.177 99.0123456790123 243 2 100 0 1 243 3306 3064 Senecavirus A isolate USA/SC05-363649/2005, complete genome blastn 24060 438 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Senecavirus Senecavirus valles
4484217 4484217 PRJNA681822_P_NODE_47684_length_540_cov_1.426124_g46228_i0 PRJNA681822 47684 540 1.426124 7.7010696 Alphanodavirus flockense 3426214 Viruses Viruses 981 0   NTclustered gi|22711883|ref|NC_004144.1| 12287 g46228 i0 99.444 8.68518518518519 540 3 100 0 1 540 1144 605 Flock house virus, complete genome blastn 4690 981 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
4484289 4484289 PRJNA681822_P_NODE_481864_length_241_cov_0.916667_g480374_i0 PRJNA681822 481864 241 0.916667 2.20916747 Potyvirus nicotianavenaobscurum 3240570 Viruses Viruses 446 8.519999999999999e-121   NTclustered gi|397711625|gb|JN630469.1| 33765 g480374 i0 100 42.3692946058091 241 0 100 0 1 241 8432 8192 Tobacco vein banding mosaic virus isolate PY, complete genome blastn 10211 446 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Patatavirales Potyviridae Potyvirus Potyvirus nicotianavenaobscurum
7033217 7033217 PRJNA681822_P_NODE_34686_length_638_cov_1.525664_g33277_i0 PRJNA681822 34686 638 1.525664 9.73373632 Alphanodavirus flockense 3426214 Viruses Viruses 1173 0   NTclustered gi|22711883|ref|NC_004144.1| 12287 g33277 i0 99.843 10.730407523511 638 1 100 0 1 638 640 3 Flock house virus, complete genome blastn 6846 1173 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
7547720 7547720 PRJNA681822_P_NODE_119546_length_368_cov_2.345763_g118059_i0 PRJNA681822 119546 368 2.345763 8.63240784 Orthorubulavirus 2560195 Viruses Viruses 675 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g118059 i0 99.728 75.2445652173913 368 1 100 0 1 368 964 597 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 27690 675 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10098827 10098827 PRJNA681822_P_NODE_202108_length_307_cov_1.564103_g200620_i0 PRJNA681822 202108 307 1.564103 4.80179621 Orthorubulavirus 2560195 Viruses Viruses 562 1.07e-155   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g200620 i0 99.674 78.257328990228 307 1 100 0 1 307 78 384 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 24025 562 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
10856031 10856031 PRJNA681822_P_NODE_142269_length_348_cov_0.905455_g140781_i0 PRJNA681822 142269 348 0.905455 3.1509834 Nilaparvata lugens C virus 1577072 Viruses Viruses 643 4.279999999999998e-180   NTclustered gi|726973360|gb|KM270560.1| 1577072 g140781 i0 100 2 348 0 100 0 1 348 7255 6908 Nilaparvata lugens C virus, complete genome blastn 696 643 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Cripavirus Nilaparvata lugens C virus
10857312 10857312 PRJNA681822_P_NODE_23509_length_783_cov_1.778873_g22231_i0 PRJNA681822 23509 783 1.778873 13.92857559 Spinach cryptic virus 1 1937817 Viruses Viruses 1400 0   NTclustered gi|1134667074|gb|KX784757.1| 1937817 g22231 i0 98.977 4.57343550446999 782 8 99 0 2 783 786 5 Spinach cryptic virus 1 isolate SRR1766329 coat protein (CP) gene, complete cds blastn 3581 1400 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Spinach cryptic virus 1
11373870 11373870 PRJNA681822_P_NODE_24269_length_771_cov_0.426934_g22978_i0 PRJNA681822 24269 771 0.426934 3.29166114 root 1 Root_unresolved Root_unresolved 1402 0   NTclustered gi|22681055|ref|NC_004146.1| 12287 g22978 i0 100 37.1712062256809 759 0 98 0 1 759 760 2 Flock house virus RNA 1, complete sequence blastn 28659 1402 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
12133519 12133519 PRJNA681822_P_NODE_30850_length_679_cov_2.430693_g29477_i0 PRJNA681822 30850 679 2.430693 16.50440547 Zebrafish picornavirus 1 2304617 Viruses Viruses 979 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g29477 i0 92.669 3.01325478645066 682 47 100 3 1 679 3232 2551 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 2046 979 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
12135228 12135228 PRJNA681822_P_NODE_443090_length_245_cov_0.895349_g441601_i0 PRJNA681822 443090 245 0.895349 2.19360505 Sedum sarmentosum crinivirus 2709776 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2320141943|gb|OM514357.1| 2709776 g441601 i0 100 2 245 0 100 0 1 245 4309 4553 MAG: Sedum sarmentosum crinivirus isolate KXLZCFY21 genomic sequence blastn 490 453 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Sedum sarmentosum crinivirus
12136933 12136933 PRJNA681822_S_NODE_1710_length_164_cov_2.444444_g1685_i0 PRJNA681822 1710 164 2.444444 4.00888816 Zebrafish picornavirus 1 2304617 Viruses Viruses 292 7.41e-75   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g1685 i0 98.78 3 164 2 100 0 1 164 7604 7767 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 492 292 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
13924745 13924745 PRJNA681822_P_NODE_3911_length_1872_cov_1.191773_g3363_i0 PRJNA681822 3911 1872 1.191773 22.30999056 root 1 Root_unresolved Root_unresolved 3446 0   NTclustered gi|22681055|ref|NC_004146.1| 12287 g3363 i0 99.893 42.9962606837607 1872 2 100 0 1 1872 2585 714 Flock house virus RNA 1, complete sequence blastn 80489 3458 0.99652978600347 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
15198659 15198659 PRJNA681822_P_NODE_186292_length_316_cov_1.901235_g184804_i0 PRJNA681822 186292 316 1.901235 6.0079026 Orthorubulavirus 2560195 Viruses Viruses 575 1.4199999999999995e-159   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g184804 i0 99.682 67.379746835443 314 1 99 0 1 314 3117 3430 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 21292 575 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
15199257 15199257 PRJNA681822_P_NODE_36672_length_619_cov_1.580586_g35256_i0 PRJNA681822 36672 619 1.580586 9.78382734 Orthorubulavirus 2560195 Viruses Viruses 1133 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g35256 i0 99.677 79.7754442649435 619 2 100 0 1 619 2288 1670 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 49381 1133 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
15199657 15199657 PRJNA681822_P_NODE_50472_length_525_cov_1.022124_g49014_i0 PRJNA681822 50472 525 1.022124 5.366151 Orthorubulavirus 2560195 Viruses Viruses 965 0   NTclustered gi|1806608684|gb|MN604146.1| 2560580 g49014 i0 99.81 69 525 1 100 0 1 525 3519 4043 Mammalian orthorubulavirus 5 isolate XJ033, complete genome blastn 36225 965 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
17231620 17231620 PRJNA681822_P_NODE_257774_length_285_cov_0.433962_g256285_i0 PRJNA681822 257774 285 0.433962 1.2367917 Alphanodavirus flockense 3426214 Viruses Viruses 527 3.59e-145   NTclustered gi|22711883|ref|NC_004144.1| 12287 g256285 i0 100 3.81052631578947 285 0 100 0 1 285 1116 1400 Flock house virus, complete genome blastn 1086 527 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus flockense
18504664 18504664 PRJNA681822_P_NODE_173535_length_325_cov_0.976190_g172047_i0 PRJNA681822 173535 325 0.97619 3.1726175 Spinach cryptic virus 1 1937817 Viruses Viruses 590 5.2299999999999986e-164   NTclustered gi|1147809908|ref|NC_033771.1| 1937817 g172047 i0 99.385 2.13538461538462 325 2 100 0 1 325 983 1307 Spinach cryptic virus 1 isolate SRR1766311 coat protein (CP) gene, complete cds blastn 694 590 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Spinach cryptic virus 1
18505152 18505152 PRJNA681822_P_NODE_20455_length_841_cov_2.839844_g19245_i0 PRJNA681822 20455 841 2.839844 23.88308804 Zebrafish picornavirus 1 2304617 Viruses Viruses 1445 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g19245 i0 97.741 2.94649227110583 841 15 100 4 1 841 871 35 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 2478 1445 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
18505404 18505404 PRJNA681822_P_NODE_2235_length_2508_cov_3.203696_g1849_i0 PRJNA681822 2235 2508 3.203696 80.34869568 Zebrafish picornavirus 1 2304617 Viruses Viruses 4056 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g1849 i0 95.853 3.00039872408293 2508 104 100 0 1 2508 3987 6494 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 7525 4056 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
18508495 18508495 PRJNA681822_P_NODE_491315_length_229_cov_2.884615_g489825_i0 PRJNA681822 491315 229 2.884615 6.60576835 Fabavirus betaviciae 3047702 Viruses Viruses 340 3.89e-89   NTclustered gi|2235068824|gb|MW192525.1| 76875 g489825 i0 93.45 54.9563318777293 229 15 100 0 1 229 866 1094 Broad bean wilt virus 2 isolate GX2 polyprotein gene, partial cds blastn 12585 340 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Fabavirus Fabavirus betaviciae
19021695 19021695 PRJNA681822_P_NODE_144335_length_346_cov_1.186813_g142847_i0 PRJNA681822 144335 346 1.186813 4.10637298 Alphanodavirus 143920 Viruses Viruses 640 5.4999999999999996e-179   NTclustered gi|60679|emb|X02396.1| 12285 g142847 i0 100 35.5433526011561 346 0 100 0 1 346 2988 2643 Black beetle virus (BBV) RNA1 and RNA3 for protein A and B blastn 12298 640 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales Nodaviridae Alphanodavirus Alphanodavirus heteronychi
19782416 19782416 PRJNA681822_P_NODE_418356_length_247_cov_3.097701_g416867_i0 PRJNA681822 418356 247 3.097701 7.65132147 Zebrafish picornavirus 1 2304617 Viruses Viruses 407 4.14e-109   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g416867 i0 96.356 3 247 9 100 0 1 247 4791 4545 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 741 407 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19783265 19783265 PRJNA681822_P_NODE_485296_length_239_cov_2.536145_g483806_i0 PRJNA681822 485296 239 2.536145 6.06138655 Chronazork virus 3129863 Viruses Viruses 148 2.66e-31   NTclustered gi|2717318517|gb|PP172260.1| 3129863 g483806 i0 79.821 44.2301255230126 223 29 88 11 24 234 97 315 MAG: Chronazork virus isolate CN1B_k141_46390 genomic sequence blastn 10571 148 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronazork virus
22328943 22328943 PRJNA681822_P_NODE_116758_length_371_cov_2.187919_g115272_i0 PRJNA681822 116758 371 2.187919 8.11717949 Zebrafish picornavirus 1 2304617 Viruses Viruses 619 7.709999999999999e-173   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g115272 i0 96.765 3 371 12 100 0 1 371 1187 817 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1113 619 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
23607379 23607379 PRJNA681822_P_NODE_334799_length_265_cov_1.203125_g333310_i0 PRJNA681822 334799 265 1.203125 3.18828125 Orthorubulavirus mammalis 3052558 Viruses Viruses 490 4.3299999999999986e-134   NTclustered gi|1028325827|gb|KX060176.1| 2905673 g333310 i0 100 84.9509433962264 265 0 100 0 1 265 2625 2361 Parainfluenza virus 5 strain AGS, complete genome blastn 22512 490 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthorubulavirus Orthorubulavirus mammalis
23610336 23610336 PRJNA681822_P_NODE_92939_length_402_cov_2.054711_g91457_i0 PRJNA681822 92939 402 2.054711 8.25993822 Zebrafish picornavirus 1 2304617 Viruses Viruses 699 0   NTclustered gi|1812398529|gb|MN524064.1| 2304617 g91457 i0 98.01 4.06965174129353 402 8 100 0 1 402 7796 8197 Zebrafish picornavirus 1 isolate CZAR/ZfPV/2018/Utah/USA, complete genome blastn 1636 699 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
24880229 24880229 PRJNA681822_P_NODE_301300_length_274_cov_1.149254_g299811_i0 PRJNA681822 301300 274 1.149254 3.14895596 Sedum sarmentosum crinivirus 2709776 Viruses Viruses 507 4.47e-139   NTclustered gi|2284931696|gb|OM514356.1| 2709776 g299811 i0 100 3 274 0 100 0 1 274 7890 8163 MAG: Sedum sarmentosum crinivirus isolate KXLZCFY120 methyltransferase, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 822 507 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Crinivirus Sedum sarmentosum crinivirus
24882972 24882972 PRJNA681822_P_NODE_6280_length_1508_cov_2.729617_g5579_i0 PRJNA681822 6280 1508 2.729617 41.16262436 Zebrafish picornavirus 1 2304617 Viruses Viruses 2377 0   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g5579 i0 95.153 2.9973474801061 1506 73 99 0 1 1506 1269 2774 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 4520 2377 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;