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contig_metadata

33 rows where analysis = "blastn", bioproject = "PRJNA681822" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 33 ✖

bioproject 1

  • PRJNA681822 · 33 ✖

analysis 1

  • blastn · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
653209 653209 PRJNA681822_P_NODE_232141_length_291_cov_0.903670_g230652_i0 PRJNA681822 232141 291 0.90367 2.6296797 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 449 8.180000000000001e-122   NTclustered gi|345452574|gb|JF694305.1| 1078836 g230652 i0 94.502 71.2783505154639 291 16 100 0 1 291 703 413 Cryptodifflugia operculata clone 9 actin gene, partial cds blastn 20742 449 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
657054 657054 PRJNA681822_P_NODE_80681_length_424_cov_1.914530_g79201_i0 PRJNA681822 80681 424 1.91453 8.1176072 Fuligo septica 159720 Evosea other_Eukaryota 752 0   NTclustered gi|37515398|emb|AJ584697.1| 159720 g79201 i0 98.821 35.6910377358491 424 2 100 3 1 424 5886 6306 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 15133 752 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
1170674 1170674 PRJNA681822_P_NODE_387561_length_251_cov_0.865169_g386072_i0 PRJNA681822 387561 251 0.865169 2.17157419 Acanthamoeba 5754 Discosea other_Eukaryota 464 2.47e-126   NTclustered gi|2044079968|gb|MZ272159.1| 5756 g386072 i0 100 100.545816733068 251 0 100 0 1 251 414 164 Acanthamoeba sp. isolate AcWT29 small subunit ribosomal RNA gene, partial sequence blastn 25237 464 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
1927397 1927397 PRJNA681822_P_NODE_100962_length_390_cov_2.189274_g99477_i0 PRJNA681822 100962 390 2.189274 8.5381686 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 518 3.06e-142   NTclustered gi|562028|gb|U12386.1|ACU12386 5755 g99477 i0 90.585 18.6435897435897 393 34 100 3 1 390 803 411 Acanthamoeba castellanii mitochondrion, complete genome blastn 7271 518 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
1930114 1930114 PRJNA681822_P_NODE_298022_length_275_cov_0.816832_g296533_i0 PRJNA681822 298022 275 0.816832 2.246288 Hagiwaraea rhizopodium 361088 Evosea other_Eukaryota 281 2.96e-71   NTclustered gi|169930326|gb|EU360787.1| 361088 g296533 i0 85.609 92.1890909090909 271 35 98 4 7 275 461 193 Hagiwaraea rhizopodium isolate Ausk Y-4 elongation factor 1 alpha gene, partial cds blastn 25352 281 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Hagiwaraea Hagiwaraea rhizopodium
1933191 1933191 PRJNA681822_P_NODE_80962_length_424_cov_0.974359_g79482_i0 PRJNA681822 80962 424 0.974359 4.13128216 Fuligo septica 159720 Evosea other_Eukaryota 508 2.02e-139   NTclustered gi|37515398|emb|AJ584697.1| 159720 g79482 i0 98.276 7.34198113207547 290 5 68 0 1 290 8670 8959 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 3113 508 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
2446081 2446081 PRJNA681822_P_NODE_37662_length_610_cov_2.668529_g36240_i0 PRJNA681822 37662 610 2.668529 16.2780269 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 630 6.0999999999999996e-176   NTclustered gi|33946352|gb|AY294155.1| 242547 g36240 i0 86.69 88.9229508196721 571 72 93 4 5 573 607 39 Glaeseria mira actin mRNA, partial cds blastn 54243 630 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Glaeseria Glaeseria mira
5754889 5754889 PRJNA681822_P_NODE_102325_length_388_cov_10.196825_g100840_i0 PRJNA681822 102325 388 10.196825 39.563681 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 571 2.3e-158   NTclustered gi|300078498|gb|GU001160.1| 5755 g100840 i0 93.35 37.2603092783505 391 19 100 6 1 388 7430 7816 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14457 571 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7031189 7031189 PRJNA681822_P_NODE_181766_length_319_cov_1.739837_g180278_i0 PRJNA681822 181766 319 1.739837 5.55008003 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 590 5.1299999999999986e-164   NTclustered gi|2402051306|gb|OP984113.1| 5778 g180278 i0 100 100 319 0 100 0 1 319 392 74 Vermamoeba vermiformis clone AD4C_R small subunit ribosomal RNA gene, partial sequence blastn 31900 590 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7547778 7547778 PRJNA681822_P_NODE_132066_length_356_cov_2.575972_g130579_i0 PRJNA681822 132066 356 2.575972 9.17046032 Protostelium 472930 Evosea other_Eukaryota 658 0   NTclustered gi|262262921|gb|FJ766464.1| 472931 g130579 i0 100 30.6601123595506 356 0 100 0 1 356 1663 1308 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 10915 658 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
8305643 8305643 PRJNA681822_P_NODE_165907_length_330_cov_1.198444_g164419_i0 PRJNA681822 165907 330 1.198444 3.9548652 Fuligo septica 159720 Evosea other_Eukaryota 224 6.22e-54   NTclustered gi|37515398|emb|AJ584697.1| 159720 g164419 i0 100 0.987878787878788 121 0 37 0 1 121 13897 14017 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 326 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
8307261 8307261 PRJNA681822_P_NODE_294087_length_276_cov_0.817734_g292598_i0 PRJNA681822 294087 276 0.817734 2.25694584 Mayorella sp. JJP-2003 242541 Discosea other_Eukaryota 405 1.69e-108   NTclustered gi|33946346|gb|AY294152.1| 242541 g292598 i0 93.116 99.1485507246377 276 19 100 0 1 276 903 628 Mayorella sp. JJP-2003 actin mRNA, partial cds blastn 27365 405 1 Eukaryota Amoebozoa   Discosea   Longamoebia   Mayorella Mayorella sp. JJP-2003
9583299 9583299 PRJNA681822_P_NODE_35868_length_627_cov_1.425993_g34456_i0 PRJNA681822 35868 627 1.425993 8.94097611 Fuligo septica 159720 Evosea other_Eukaryota 1077 0   NTclustered gi|37515398|emb|AJ584697.1| 159720 g34456 i0 98.374 39.274322169059 615 6 98 4 1 614 7440 8051 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 24625 1077 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
11373453 11373453 PRJNA681822_P_NODE_139929_length_349_cov_5.576087_g138441_i0 PRJNA681822 139929 349 5.576087 19.46054363 Protostelium 472930 Evosea other_Eukaryota 640 5.529999999999999e-179   NTclustered gi|262262921|gb|FJ766464.1| 472931 g138441 i0 99.713 64.2750716332378 349 1 100 0 1 349 362 14 Protostelium mycophagum strain KA-T15-2 small subunit ribosomal RNA gene, partial sequence blastn 22432 645 0.992248062015504 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium mycophagum
12131205 12131205 PRJNA681822_P_NODE_137610_length_351_cov_5.500000_g136122_i0 PRJNA681822 137610 351 5.5 19.305 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 638 1.9999999999999996e-178   NTclustered gi|300078496|gb|GU001158.1| 5778 g136122 i0 99.43 50.2022792022792 351 2 100 0 1 351 4027 4377 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17621 638 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
12132756 12132756 PRJNA681822_P_NODE_241150_length_288_cov_2.381395_g239661_i0 PRJNA681822 241150 288 2.381395 6.8584176 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 499 7.92e-137   NTclustered gi|345452574|gb|JF694305.1| 1078836 g239661 i0 97.917 97.3923611111111 288 6 100 0 1 288 161 448 Cryptodifflugia operculata clone 9 actin gene, partial cds blastn 28049 499 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
12136268 12136268 PRJNA681822_P_NODE_66290_length_461_cov_1.481959_g64816_i0 PRJNA681822 66290 461 1.481959 6.83183099 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 394 6.45e-105   NTclustered gi|421976286|gb|JQ519399.1| 1078836 g64816 i0 88.308 14.3492407809111 325 38 70 0 137 461 475 151 Cryptodifflugia operculata clone JG11.5_7 14-3-3 protein gene, partial cds blastn 6615 394 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
13407284 13407284 PRJNA681822_P_NODE_23371_length_785_cov_3.271067_g22095_i0 PRJNA681822 23371 785 3.271067 25.67787595 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1013 0   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g22095 i0 89.975 35.8662420382166 788 74 100 5 1 785 3038 2253 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28155 1013 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
13407867 13407867 PRJNA681822_P_NODE_288171_length_277_cov_1.509804_g286682_i0 PRJNA681822 288171 277 1.509804 4.18215708 Fuligo sp. BX-2002 211112 Evosea other_Eukaryota 507 4.53e-139   NTclustered gi|24711464|gb|AY145526.1| 211112 g286682 i0 99.639 99.4296028880866 277 1 100 0 1 277 407 683 Fuligo sp. BX-2002 18S ribosomal RNA gene, partial sequence blastn 27542 507 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo sp. BX-2002
13409589 13409589 PRJNA681822_P_NODE_433471_length_246_cov_0.890173_g431982_i0 PRJNA681822 433471 246 0.890173 2.18982558 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 230 9.56e-56   NTclustered gi|909719694|gb|KT185628.1| 5755 g431982 i0 83.806 6.19105691056911 247 34 99 5 1 244 90 333 Acanthamoeba castellanii isolate BCP-EM3VF21-1 mitochondrion, complete genome blastn 1523 230 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13410322 13410322 PRJNA681822_P_NODE_490551_length_231_cov_2.189873_g489061_i0 PRJNA681822 490551 231 2.189873 5.05860663 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 379 8.339999999999999e-101   NTclustered gi|330902855|gb|JF298253.1| 1017091 g489061 i0 96.137 50.6233766233766 233 7 100 1 1 231 1090 1322 Cochliopodium larifeili clone 901 18S ribosomal RNA gene, partial sequence blastn 11694 379 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
13410850 13410850 PRJNA681822_P_NODE_69191_length_452_cov_1.775726_g67717_i0 PRJNA681822 69191 452 1.775726 8.02628152 Cochliopodium larifeili 1017091 Discosea other_Eukaryota 765 0   NTclustered gi|330902861|gb|JF298256.1| 1017091 g67717 i0 97.345 79.2035398230089 452 8 100 3 1 452 207 654 Cochliopodium larifeili clone 907 18S ribosomal RNA gene, partial sequence blastn 35800 765 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium larifeili
14682134 14682134 PRJNA681822_P_NODE_214972_length_299_cov_2.898230_g213484_i0 PRJNA681822 214972 299 2.89823 8.6657077 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 350 8.800000000000001e-92   NTclustered gi|1071035029|gb|KX580904.1| 5755 g213484 i0 87.919 7.20401337792642 298 34 99 2 1 297 3544 3840 Acanthamoeba castellanii strain TN mitochondrion, complete genome blastn 2154 350 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15960065 15960065 PRJNA681822_P_NODE_87633_length_411_cov_1.488166_g86151_i0 PRJNA681822 87633 411 1.488166 6.11636226 Fuligo sp. BX-2002 211112 Evosea other_Eukaryota 760 0   NTclustered gi|24711464|gb|AY145526.1| 211112 g86151 i0 100 52.0510948905109 411 0 100 0 1 411 1083 673 Fuligo sp. BX-2002 18S ribosomal RNA gene, partial sequence blastn 21393 760 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo sp. BX-2002
19779424 19779424 PRJNA681822_P_NODE_183796_length_318_cov_1.257143_g182308_i0 PRJNA681822 183796 318 1.257143 3.99771474 Vexillifera fluvialis 1105343 Discosea other_Eukaryota 588 1.84e-163   NTclustered gi|354720323|gb|HQ687482.1| 1105343 g182308 i0 100 66.3930817610063 318 0 100 0 1 318 863 1180 Vexillifera fluvialis strain RR1 small subunit ribosomal RNA gene, partial sequence blastn 21113 588 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera fluvialis
19780198 19780198 PRJNA681822_P_NODE_23656_length_780_cov_6.721358_g22372_i0 PRJNA681822 23656 780 6.721358 52.4265924 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 1020 0   NTclustered gi|345452574|gb|JF694305.1| 1078836 g22372 i0 95.069 94.1076923076923 649 30 83 2 133 780 795 148 Cryptodifflugia operculata clone 9 actin gene, partial cds blastn 73404 1020 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
19783184 19783184 PRJNA681822_P_NODE_479416_length_241_cov_0.916667_g477926_i0 PRJNA681822 479416 241 0.916667 2.20916747 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 139 1.62e-28   NTclustered gi|470448038|ref|XM_004340073.1| 1257118 g477926 i0 88.034 4.63900414937759 117 14 49 0 110 226 109 225 Acanthamoeba castellanii str. Neff RINGbox protein 1, putative (ACA1_368020), partial mRNA blastn 1118 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22329198 22329198 PRJNA681822_P_NODE_131798_length_357_cov_1.084507_g130311_i0 PRJNA681822 131798 357 1.084507 3.87168999 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 243 1.8700000000000001e-59   NTclustered gi|421976286|gb|JQ519399.1| 1078836 g130311 i0 82.784 3.40336134453782 273 45 76 2 84 355 74 345 Cryptodifflugia operculata clone JG11.5_7 14-3-3 protein gene, partial cds blastn 1215 243 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
23608203 23608203 PRJNA681822_P_NODE_402579_length_249_cov_0.875000_g401090_i0 PRJNA681822 402579 249 0.875 2.17875 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 58.4 4.84e-4   NTclustered gi|470444690|ref|XM_004339736.1| 1257118 g401090 i0 92.683 0.164658634538153 41 1 16 1 118 156 2360 2400 Acanthamoeba castellanii str. Neff protein kinase domain containing protein (ACA1_065920), partial mRNA blastn 41 58.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23608230 23608230 PRJNA681822_P_NODE_404319_length_249_cov_0.875000_g402830_i0 PRJNA681822 404319 249 0.875 2.17875 Fuligo septica 159720 Evosea other_Eukaryota 398 2.51e-106   NTclustered gi|37515398|emb|AJ584697.1| 159720 g402830 i0 95.582 1 249 9 100 1 1 249 6516 6270 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 249 398 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
24122441 24122441 PRJNA681822_P_NODE_32159_length_664_cov_2.304569_g30767_i0 PRJNA681822 32159 664 2.304569 15.30233816 Vermamoeba 1260114 Tubulinea other_Eukaryota 1116 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g30767 i0 96.997 56.480421686747 666 16 100 3 1 664 5773 5110 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 37503 1116 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
24882577 24882577 PRJNA681822_P_NODE_488380_length_234_cov_2.813665_g486890_i0 PRJNA681822 488380 234 2.813665 6.5839761 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 189 1.53e-43   NTclustered gi|300078498|gb|GU001160.1| 5755 g486890 i0 81.673 17.3205128205128 251 25 100 15 1 234 6215 6461 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4053 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
25396454 25396454 PRJNA681822_P_NODE_169340_length_327_cov_3.807087_g167852_i0 PRJNA681822 169340 327 3.807087 12.44917449 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 588 1.8999999999999994e-163   NTclustered gi|909719646|gb|KT185626.1| 5755 g167852 i0 99.083 62.1131498470948 327 3 100 0 1 327 3923 3597 Acanthamoeba castellanii 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 20311 588 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;