RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA680334" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA680334 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5753851 5753851 PRJNA680334_S_NODE_69545_length_173_cov_1.328571_g69059_i0 PRJNA680334 69545 173 1.328571 2.29842783 Stygiolobus caldivivus 2824673 Archaea Archaea 54.7 0.004   NTclustered gi|2051082101|dbj|AP024597.1| 2824673 g69059 i0 100 0.167630057803468 29 0 17 0 129 157 304771 304799 Stygiolobus sp. KN-1 DNA, complete genome blastn 29 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Stygiolobus Stygiolobus caldivivus
24875864 24875864 PRJNA680334_S_NODE_41420_length_203_cov_5.782353_g40934_i0 PRJNA680334 41420 203 5.782353 11.73817659 Methanosphaera sp. ISO3-F5 1452353 Archaea Archaea 52.8 0.018   NTclustered gi|2695672541|gb|CP118754.2| 1452353 g40934 i0 100 0.137931034482759 28 0 14 0 8 35 141740 141713 Methanosphaera sp. ISO3-F5 plasmid pNP174, complete sequence blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp. ISO3-F5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;