contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA680334" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12129263 | 12129263 | PRJNA680334_S_NODE_49150_length_193_cov_2.043750_g48664_i0 | PRJNA680334 | 49150 | 193 | 2.04375 | 3.9444375 | Myxococcus stipitatus | 83455 | Bacteria | Bacteria | 119 | 1.62e-22 | NTclustered | gi|2722781719|gb|CP102770.1| | 83455 | g48664 | i0 | 82.143 | 0.725388601036269 | 140 | 23 | 72 | 2 | 55 | 193 | 5023671 | 5023533 | Myxococcus stipitatus strain YRE12 chromosome, complete genome | blastn | 140 | 119 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus stipitatus | ||
| 15953333 | 15953333 | PRJNA680334_S_NODE_90753_length_158_cov_5.248000_g90267_i0 | PRJNA680334 | 90753 | 158 | 5.248 | 8.29184 | Myxococcales bacterium UTMC 4097 | 1826750 | Bacteria | Bacteria | 261 | 1.99e-65 | NTclustered | gi|1015860418|gb|KU923380.1| | 1826750 | g90267 | i0 | 96.795 | 99.7721518987342 | 156 | 5 | 99 | 0 | 3 | 158 | 1148 | 1303 | Myxobacteria bacterium UTMC 4097 16S ribosomal RNA gene, partial sequence | blastn | 15764 | 261 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium UTMC 4097 | ||||
| 22326868 | 22326868 | PRJNA680334_S_NODE_27498_length_230_cov_32.035533_g27012_i0 | PRJNA680334 | 27498 | 230 | 32.035533 | 73.6817259 | uncultured Haliangium sp. | 373538 | Bacteria | Bacteria | 220 | 5.32e-53 | NTclustered | gi|310755276|gb|HQ213166.1| | 373538 | g27012 | i0 | 93.333 | 6.2695652173913 | 150 | 8 | 65 | 2 | 61 | 209 | 930 | 1078 | Uncultured Haliangium sp. clone 3_E01 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 1442 | 220 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Haliangium | uncultured Haliangium sp. | |||
| 24121254 | 24121254 | PRJNA680334_S_NODE_56099_length_185_cov_2.394737_g55613_i0 | PRJNA680334 | 56099 | 185 | 2.394737 | 4.43026345 | root | 1 | Root_unresolved | Root_unresolved | 259 | 8.67e-65 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g55613 | i0 | 93.22 | 85.5945945945946 | 177 | 10 | 95 | 2 | 11 | 185 | 1622 | 1798 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 15835 | 261 | 0.992337164750958 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 24121331 | 24121331 | PRJNA680334_S_NODE_82859_length_163_cov_2.900000_g82373_i0 | PRJNA680334 | 82859 | 163 | 2.9 | 4.727 | Sorangium | 39643 | Bacteria | Bacteria | 263 | 5.77e-66 | NTclustered | gi|1338588479|gb|CP012673.1| | 56 | g82373 | i0 | 95.706 | 105.969325153374 | 163 | 7 | 100 | 0 | 1 | 163 | 3449509 | 3449671 | Sorangium cellulosum strain So ce26 chromosome, complete genome | blastn | 17273 | 263 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;