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contig_metadata

24 rows where analysis = "blastn", bioproject = "PRJNA680334" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 24 ✖

bioproject 1

  • PRJNA680334 · 24 ✖

analysis 1

  • blastn · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
649533 649533 PRJNA680334_S_NODE_35341_length_213_cov_11.938889_g34855_i0 PRJNA680334 35341 213 11.938889 25.42983357 Grapevine partitivirus 1256786 Viruses Viruses 385 1.63e-102   NTclustered gi|1613874758|gb|MH802024.1| 1256786 g34855 i0 99.526 1.981220657277 211 1 99 0 1 211 1679 1889 Grapevine partitivirus isolate 12G4125, complete sequence blastn 422 385 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Grapevine partitivirus
3200761 3200761 PRJNA680334_S_NODE_50563_length_191_cov_3.436709_g50077_i0 PRJNA680334 50563 191 3.436709 6.56411419 Totiviridae sp. 1955172 Viruses Viruses 316 5.28e-82   NTclustered gi|2396039066|gb|ON812734.1| 1955172 g50077 i0 96.825 2.98952879581152 189 6 99 0 3 191 2289 2477 MAG: Totiviridae sp. isolate TIGMIC_6 genomic sequence blastn 571 316 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
5752906 5752906 PRJNA680334_S_NODE_16565_length_269_cov_7.241525_g16079_i0 PRJNA680334 16565 269 7.241525 19.47970225 Alphapartitivirus carotae 3426226 Viruses Viruses 496 9.47e-136   NTclustered gi|1464310058|ref|NC_038824.1| 589918 g16079 i0 100 0.996282527881041 268 0 99 0 1 268 1906 1639 Carrot cryptic virus segment RNA 1 RNA-dependent RNA polymerase gene, complete cds blastn 268 496 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Alphapartitivirus Alphapartitivirus carotae
5753240 5753240 PRJNA680334_S_NODE_3545_length_427_cov_36.314721_g3064_i0 PRJNA680334 3545 427 36.314721 155.06385867 Erysiphe necator associated ourmia-like virus 87 2741867 Viruses Viruses 597 4.219999999999998e-166   NTclustered gi|2798495165|gb|PP945076.1| 2741867 g3064 i0 92.771 4.70725995316159 415 27 97 3 13 426 2185 1773 Erysiphe necator associated ourmia-like virus 87 strain China-NX113 RNA-dependent RNA polymerase gene, complete cds blastn 2010 597 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 87
7027981 7027981 PRJNA680334_S_NODE_19366_length_257_cov_2.937500_g18880_i0 PRJNA680334 19366 257 2.9375 7.549375 Fushun dicistrovirus 1 2905403 Viruses Viruses 394 3.37e-105   NTclustered gi|2169232434|gb|MZ210045.1| 2905403 g18880 i0 94.862 0.98443579766537 253 11 98 2 7 257 8611 8863 MAG: Fushun dicistrovirus 1 isolate XSZFS89, complete genome blastn 253 394 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Fushun dicistrovirus 1
8302653 8302653 PRJNA680334_S_NODE_18227_length_261_cov_20.030702_g17741_i0 PRJNA680334 18227 261 20.030702 52.28013222 Erysiphe necator associated ourmia-like virus 87 2741867 Viruses Viruses 425 1.22e-114   NTclustered gi|1848976707|gb|MN611615.1| 2741867 g17741 i0 96.154 1.99233716475096 260 10 99 0 1 260 1653 1394 Erysiphe necator associated ourmia-like virus 87 isolate PMS5_114, complete genome blastn 520 425 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 87
8302744 8302744 PRJNA680334_S_NODE_23747_length_241_cov_4.908654_g23261_i0 PRJNA680334 23747 241 4.908654 11.82985614 Skokie reo-like virus 2789444 Viruses Viruses 126 1.26e-24   NTclustered gi|1933757587|gb|MW177748.1| 2789444 g23261 i0 92.135 0.369294605809129 89 7 37 0 153 241 1 89 Skokie reo-like virus strain USAdf hypothetical protein 2 gene, complete cds blastn 89 126 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Skokie reo-like virus
10853379 10853379 PRJNA680334_S_NODE_1729_length_540_cov_47.282051_g1273_i0 PRJNA680334 1729 540 47.282051 255.3230754 Zebrafish jaw picornavirus RQ13 Viruses Viruses 499 1.5799999999999999e-136   NTclustered gi|2626604933|gb|OR645505.1| RQ13 g1273 i0 85.2 4.82407407407407 500 59 91 14 2 493 7324 7816 MAG: Passerivirus GPS isolate OM4 polyprotein gene, complete cds blastn 2605 499 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Passerivirus Zebrafish jaw picornavirus
10853689 10853689 PRJNA680334_S_NODE_3349_length_435_cov_5.783582_g2868_i0 PRJNA680334 3349 435 5.783582 25.1585817 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 693 0   NTclustered gi|2196304039|gb|MZ679032.1| 3003959 g2868 i0 95.612 8.50574712643678 433 17 99 2 1 433 4730 5160 MAG: Picornavirales sp. isolate 377R-k141_737244 putative polyprotein gene, partial cds blastn 3700 693 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
10853907 10853907 PRJNA680334_S_NODE_4589_length_396_cov_17.801653_g4106_i0 PRJNA680334 4589 396 17.801653 70.49454588 Potexvirus trifolii 3433859 Viruses Viruses 643 4.919999999999999e-180   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g4106 i0 95.96 31.4974747474747 396 16 100 0 1 396 5448 5843 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 12473 643 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
12128412 12128412 PRJNA680334_S_NODE_10010_length_314_cov_6.583630_g9524_i0 PRJNA680334 10010 314 6.58363 20.6725982 Red mite dicistrovirus 1 2936551 Viruses Viruses 529 1.1099999999999996e-145   NTclustered gi|2239998172|gb|ON160029.1| 2936551 g9524 i0 97.125 0.996815286624204 313 9 99 0 1 313 2139 2451 Red mite dicistrovirus 1 isolate RMDIV1 polyprotein gene, complete cds blastn 313 529 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Red mite dicistrovirus 1
12129689 12129689 PRJNA680334_S_NODE_74090_length_169_cov_2.867647_g73604_i0 PRJNA680334 74090 169 2.867647 4.84632343 Zebrafish jaw picornavirus RQ13 Viruses Viruses 196 6.16e-46   NTclustered gi|2626604933|gb|OR645505.1| RQ13 g73604 i0 87.952 1.94674556213018 166 20 98 0 1 166 7348 7183 MAG: Passerivirus GPS isolate OM4 polyprotein gene, complete cds blastn 329 196 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Passerivirus Zebrafish jaw picornavirus
13403676 13403676 PRJNA680334_S_NODE_34931_length_214_cov_4.767956_g34445_i0 PRJNA680334 34931 214 4.767956 10.20342584 Botourmiaviridae sp. 2808997 Viruses Viruses 219 1.7599999999999998e-52   NTclustered gi|2320142628|gb|ON585088.1| 2808997 g34445 i0 89.326 0.831775700934579 178 13 82 5 40 214 2352 2526 MAG: Botourmiaviridae sp. isolate PMS2_Contig239 RNA-dependent RNA polymerase gene, complete cds blastn 178 219 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
13404545 13404545 PRJNA680334_S_NODE_8751_length_326_cov_16.058020_g8265_i0 PRJNA680334 8751 326 16.05802 52.3491452 Potexvirus trifolii 3433859 Viruses Viruses 448 3.3499999999999996e-121   NTclustered gi|61323|emb|X16636.1| 12188 g8265 i0 91.875 25.319018404908 320 26 98 0 7 326 5527 5846 White clover mosaic virus total genomic mRNA blastn 8254 448 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
14678355 14678355 PRJNA680334_S_NODE_1712_length_542_cov_9.377210_g1257_i0 PRJNA680334 1712 542 9.37721 50.8244782 Tobamovirus plantagonis 3432885 Viruses Viruses 850 0   NTclustered gi|1820428442|gb|MT129775.1| 51680 g1257 i0 95.009 36.7859778597786 541 27 99 0 1 541 5495 4955 Ribgrass mosaic virus strain GudgCC_DN40115-8, complete genome blastn 19938 850 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus plantagonis
14679261 14679261 PRJNA680334_S_NODE_6872_length_351_cov_7.025157_g6386_i0 PRJNA680334 6872 351 7.025157 24.65830107 Nepovirus avii 3047741 Viruses Viruses 625 1.5599999999999998e-174   NTclustered gi|2419396264|gb|ON924207.1| 12615 g6386 i0 98.86 96.1168091168091 351 3 99 1 2 351 6005 6355 Cherry leaf roll virus isolate DSMZ PV-0200 segment RNA 2, complete sequence blastn 33737 625 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Secoviridae Nepovirus Nepovirus avii
15952584 15952584 PRJNA680334_S_NODE_44893_length_198_cov_5.266667_g44407_i0 PRJNA680334 44893 198 5.266667 10.42800066 Alphapartitivirus carotae 3426226 Viruses Viruses 366 5.4e-97   NTclustered gi|1464310056|ref|NC_038823.1| 589918 g44407 i0 100 1 198 0 100 0 1 198 1458 1261 Carrot cryptic virus segment RNA 2 coat protein gene, complete cds blastn 198 366 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae Alphapartitivirus Alphapartitivirus carotae
17228102 17228102 PRJNA680334_S_NODE_59874_length_181_cov_3.290541_g59388_i0 PRJNA680334 59874 181 3.290541 5.95587921 Alphachrysovirus perseae 2955248 Viruses Viruses 313 6.39e-81   NTclustered gi|1694999067|ref|NC_043508.1| 1587509 g59388 i0 98.857 0.966850828729282 175 2 97 0 1 175 1848 1674 Persea americana chrysovirus segment RNA2, complete sequence blastn 175 313 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Chrysoviridae Alphachrysovirus Alphachrysovirus perseae
17228358 17228358 PRJNA680334_S_NODE_754_length_799_cov_25.552219_g377_i0 PRJNA680334 754 799 25.552219 204.16222981 Red mite dicistrovirus 1 2936551 Viruses Viruses 778 0   NTclustered gi|2239998172|gb|ON160029.1| 2936551 g377 i0 97.577 0.996245306633292 454 11 98 0 339 792 8562 9015 Red mite dicistrovirus 1 isolate RMDIV1 polyprotein gene, complete cds blastn 796 778 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Red mite dicistrovirus 1
17228690 17228690 PRJNA680334_S_NODE_94914_length_156_cov_2.723577_g94428_i0 PRJNA680334 94914 156 2.723577 4.24878012 Coltivirus dermacentoris 3428066 Viruses Viruses 209 7.2e-50   NTclustered gi|2758887253|gb|PP473574.1| 46839 g94428 i0 90.968 4.75 155 14 99 0 2 156 4697 4543 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 741 209 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris
17747049 17747049 PRJNA680334_S_NODE_2334_length_487_cov_49.004405_g1861_i0 PRJNA680334 2334 487 49.004405 238.65145235 Botourmiaviridae 2560063 Viruses Viruses 75 1.01e-8   NTclustered gi|2500381378|ref|NC_076801.1| 2686545 g1861 i0 100 2.48459958932238 40 0 8 0 1 40 2325 2286 Plasmopara viticola lesion associated ourmia-like virus 72 isolate DMG-F_43929 RNA dependent RNA polymerase (QKR77_gp1) gene, complete cds blastn 1210 75 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Scleroulivirus Scleroulivirus lambdaplasmoparae
19776464 19776464 PRJNA680334_S_NODE_33376_length_217_cov_6.342391_g32890_i0 PRJNA680334 33376 217 6.342391 13.76298847 Erysiphe necator associated ourmia-like virus 85 2741865 Viruses Viruses 329 7.91e-86   NTclustered gi|1848976703|gb|MN611613.1| 2741865 g32890 i0 94.009 2 217 13 100 0 1 217 1446 1662 Erysiphe necator associated ourmia-like virus 85 isolate PMS4_45, complete genome blastn 434 329 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 85
22846723 22846723 PRJNA680334_S_NODE_54598_length_186_cov_8.124183_g54112_i0 PRJNA680334 54598 186 8.124183 15.11098038 Alphainfluenzavirus 197911 Viruses Viruses 313 6.61e-81   NTclustered gi|31505997|gb|AY294658.1| 232197 g54112 i0 99.419 91.8924731182796 172 1 92 0 15 186 1553 1382 Influenza A virus (A/Sw/ShanDong/1/2003(H9N2)) hemagglutinin (HA) mRNA, complete cds blastn 17092 313 1 Viruses   Orthornavirae Negarnaviricota Insthoviricetes Articulavirales Orthomyxoviridae Alphainfluenzavirus Alphainfluenzavirus influenzae
24876007 24876007 PRJNA680334_S_NODE_4900_length_388_cov_6.878873_g4416_i0 PRJNA680334 4900 388 6.878873 26.69002724 Bromovirus BMV 3427622 Viruses Viruses 712 0   NTclustered gi|2214792991|gb|MW581063.1| 12302 g4416 i0 99.742 36.788659793814404 388 1 100 0 1 388 815 1202 Brome mosaic virus isolate BMV-R movement protein and coat protein genes, complete cds blastn 14274 712 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;