RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA680334" and tax_kingdom = "Loebvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA680334 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3200359 3200359 PRJNA680334_S_NODE_28303_length_229_cov_1.688776_g27817_i0 PRJNA680334 28303 229 1.688776 3.86729704 Tubulavirales sp. 2833306 Viruses Viruses 385 1.77e-102   NTclustered gi|2906153236|gb|PQ646714.1| 2833306 g27817 i0 96.943 1 229 7 100 0 1 229 3586 3814 MAG: Tubulavirales sp. isolate k127_4197263 genomic sequence blastn 229 385 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.
8303354 8303354 PRJNA680334_S_NODE_59587_length_181_cov_5.554054_g59101_i0 PRJNA680334 59587 181 5.554054 10.05283774 Tubulavirales sp. 2833306 Viruses Viruses 279 6.48e-71   NTclustered gi|2906153236|gb|PQ646714.1| 2833306 g59101 i0 94.475 1 181 10 100 0 1 181 382 562 MAG: Tubulavirales sp. isolate k127_4197263 genomic sequence blastn 181 279 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.
18502100 18502100 PRJNA680334_S_NODE_49815_length_192_cov_2.924528_g49329_i0 PRJNA680334 49815 192 2.924528 5.61509376 Inoviridae sp. 2219103 Viruses Viruses 313 6.87e-81   NTclustered gi|2059842810|tpg|BK040365.1| 2219103 g49329 i0 96.316 0.989583333333333 190 7 99 0 3 192 2587 2776 MAG TPA_asm: Inoviridae sp. isolate ct1wt16, partial genome blastn 190 313 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;