contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA680334" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12648538 | 12648538 | PRJNA680334_S_NODE_29150_length_227_cov_1.731959_g28664_i0 | PRJNA680334 | 29150 | 227 | 1.731959 | 3.93154693 | Fusobacterium | 848 | Bacteria | Bacteria | 383 | 6.31e-102 | NTclustered | gi|2704993027|gb|CP077141.1| | 851 | g28664 | i0 | 99.524 | 53.0352422907489 | 210 | 1 | 93 | 0 | 18 | 227 | 2075088 | 2075297 | Fusobacterium nucleatum strain KCOM2902 chromosome, complete genome | blastn | 12039 | 383 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 15952454 | 15952454 | PRJNA680334_S_NODE_37773_length_209_cov_4.619318_g37287_i0 | PRJNA680334 | 37773 | 209 | 4.619318 | 9.65437462 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 272 | 1.29e-68 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g37287 | i0 | 91.414 | 1.94736842105263 | 198 | 17 | 95 | 0 | 12 | 209 | 1054312 | 1054115 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 407 | 272 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 17227718 | 17227718 | PRJNA680334_S_NODE_37854_length_209_cov_3.539773_g37368_i0 | PRJNA680334 | 37854 | 209 | 3.539773 | 7.39812557 | Leptotrichia buccalis | 40542 | Bacteria | Bacteria | 381 | 2.0599999999999996e-101 | NTclustered | gi|257048753|gb|CP001685.1| | 523794 | g37368 | i0 | 99.522 | 67.6937799043062 | 209 | 1 | 100 | 0 | 1 | 209 | 240444 | 240652 | Leptotrichia buccalis DSM 1135, complete genome | blastn | 14148 | 381 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia buccalis | ||
| 17228601 | 17228601 | PRJNA680334_S_NODE_9034_length_324_cov_2.965636_g8548_i0 | PRJNA680334 | 9034 | 324 | 2.965636 | 9.60866064 | Fusobacterium ulcerans | 861 | Bacteria | Bacteria | 169 | 2.9e-37 | NTclustered | gi|1370545701|gb|CP028105.1| | 861 | g8548 | i0 | 81.019 | 2.09259259259259 | 216 | 37 | 66 | 4 | 1 | 214 | 2612443 | 2612230 | Fusobacterium ulcerans strain ATCC 49185 chromosome, complete genome | blastn | 678 | 169 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium ulcerans | ||
| 19777397 | 19777397 | PRJNA680334_S_NODE_87696_length_160_cov_3.196850_g87210_i0 | PRJNA680334 | 87696 | 160 | 3.19685 | 5.11496 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 250 | 4.38e-62 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g87210 | i0 | 95 | 14.38125 | 160 | 7 | 100 | 1 | 1 | 160 | 1937525 | 1937367 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 2301 | 250 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 20295638 | 20295638 | PRJNA680334_S_NODE_44436_length_199_cov_2.909639_g43950_i0 | PRJNA680334 | 44436 | 199 | 2.909639 | 5.79018161 | Streptobacillus | 34104 | Bacteria | Bacteria | 318 | 1.54e-82 | NTclustered | gi|470485174|ref|NR_076688.1| | 34105 | g43950 | i0 | 95.5 | 102.085427135678 | 200 | 8 | 100 | 1 | 1 | 199 | 163 | 362 | Streptobacillus moniliformis strain DSM 12112 23S ribosomal RNA gene, complete sequence | blastn | 20315 | 318 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Streptobacillus | Streptobacillus moniliformis | ||
| 20295664 | 20295664 | PRJNA680334_S_NODE_54156_length_187_cov_2.733766_g53670_i0 | PRJNA680334 | 54156 | 187 | 2.733766 | 5.11214242 | Leptotrichia | 32067 | Bacteria | Bacteria | 252 | 1.47e-62 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g53670 | i0 | 90.909 | 17.3903743315508 | 187 | 17 | 100 | 0 | 1 | 187 | 2405420 | 2405234 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 3252 | 252 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 22327224 | 22327224 | PRJNA680334_S_NODE_48418_length_194_cov_1.366460_g47932_i0 | PRJNA680334 | 48418 | 194 | 1.36646 | 2.6509324 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 298 | 1.95e-76 | NTclustered | gi|2706501641|gb|CP084157.1| | 76857 | g47932 | i0 | 94.33 | 2.9639175257732 | 194 | 11 | 100 | 0 | 1 | 194 | 1736892 | 1737085 | Fusobacterium polymorphum strain KCOM2446 chromosome, complete genome | blastn | 575 | 298 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 24876315 | 24876315 | PRJNA680334_S_NODE_66900_length_175_cov_1.838028_g66414_i0 | PRJNA680334 | 66900 | 175 | 1.838028 | 3.216549 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 324 | 2.83e-84 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g66414 | i0 | 100 | 474.142857142857 | 175 | 0 | 100 | 0 | 1 | 175 | 577182 | 577356 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 82975 | 324 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;