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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA680334" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA680334 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
649566 649566 PRJNA680334_S_NODE_37701_length_209_cov_5.909091_g37215_i0 PRJNA680334 37701 209 5.909091 12.35000019 Psalteriomonas lanterna 31290 Heterolobosea other_Eukaryota 117 6.41e-22   NTclustered gi|273161171|gb|GQ924932.1| 31290 g37215 i0 79.641 0.799043062200957 167 30 79 4 34 198 1179 1015 Psalteriomonas lanterna elongation factor 1 alpha (EF-1alpha) mRNA, partial cds; hydrogenosome blastn 167 117 1 Eukaryota Discoba   Heterolobosea     Psalteriomonadidae Psalteriomonas Psalteriomonas lanterna
4997589 4997589 PRJNA680334_S_NODE_26544_length_233_cov_4.830000_g26058_i0 PRJNA680334 26544 233 4.83 11.2539 Leishmania 5658 Euglenozoa other_Eukaryota 159 1.19e-34   NTclustered gi|383215276|gb|JQ648649.1| 5679 g26058 i0 88.722 57.8927038626609 133 12 57 3 96 227 4737 4867 Leishmania panamensis strain UA946 28S ribosomal RNA gene, complete sequence blastn 13489 159 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania panamensis
5754057 5754057 PRJNA680334_S_NODE_81665_length_164_cov_1.969466_g81179_i0 PRJNA680334 81665 164 1.969466 3.22992424 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 281 1.6000000000000001e-71   NTclustered gi|290980313|ref|XM_002672831.1| 5762 g81179 i0 97.561 1 164 4 100 0 1 164 388 225 Naegleria gruberi ribosomal protein L30 (NAEGRDRAFT_81081), mRNA blastn 164 281 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7028442 7028442 PRJNA680334_S_NODE_4326_length_403_cov_46.802703_g3844_i0 PRJNA680334 4326 403 46.802703 188.61489309 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 433 1.1799999999999998e-116   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g3844 i0 86.064 137.875930521092 409 49 100 6 1 403 4386 4792 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 55564 433 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
7547238 7547238 PRJNA680334_S_NODE_56046_length_185_cov_2.644737_g55560_i0 PRJNA680334 56046 185 2.644737 4.89276345 root 1 Root_unresolved Root_unresolved 80.5 7.25e-11   NTclustered gi|1523709950|gb|MH664049.1| 2282701 g55560 i0 92.857 25.3243243243243 56 2 30 2 6 61 54 1 Allobodo chlorophagus isolate CAK12 trans-spliced leader (SL) gene, complete sequence blastn 4685 80.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Allobodo Allobodo chlorophagus
12648625 12648625 PRJNA680334_S_NODE_5390_length_378_cov_5.562319_g4905_i0 PRJNA680334 5390 378 5.562319 21.02556582 Phytomonas 5706 Euglenozoa other_Eukaryota 167 1.23e-36   NTclustered gi|9716454|gb|AF243335.1| 134003 g4905 i0 95.238 28.6825396825397 105 5 28 0 274 378 244 348 Phytomonas sp. isolate Alp 1 5S ribosomal RNA gene, partial sequence; 5S ribosomal RNA gene, complete sequence; and 5S ribosomal RNA gene, partial sequence blastn 10842 167 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Phytomonas Phytomonas sp. isolate Alp1
12648692 12648692 PRJNA680334_S_NODE_7630_length_340_cov_5.648208_g7144_i0 PRJNA680334 7630 340 5.648208 19.2039072 Naegleria 5761 Heterolobosea other_Eukaryota 606 5.469999999999998e-169   NTclustered gi|2618963742|gb|OR769034.1| 5762 g7144 i0 100 9.77941176470588 328 0 96 0 1 328 5476 5803 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3325 606 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13404018 13404018 PRJNA680334_S_NODE_57051_length_184_cov_2.463576_g56565_i0 PRJNA680334 57051 184 2.463576 4.53297984 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 69.4 1.56e-7   NTclustered gi|1002447946|ref|XM_015802976.1| 157538 g56565 i0 93.478 0.706521739130435 46 3 25 0 130 175 734 689 Leptomonas pyrrhocoris putative mitochondrial translation elongation factor 1-beta mRNA blastn 130 69.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
17227439 17227439 PRJNA680334_S_NODE_21794_length_248_cov_2.553488_g21308_i0 PRJNA680334 21794 248 2.553488 6.33265024 Trypanosoma brucei 5691 Euglenozoa other_Eukaryota 75 4.79e-9   NTclustered gi|62175798|gb|AC159426.1| 5691 g21308 i0 83.75 0.645161290322581 80 11 32 2 6 84 17476 17554 Trypanosoma brucei isolate GUTat10.1 chromosome 7 clone RPCI93-27M11, complete sequence blastn 160 75 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
18502641 18502641 PRJNA680334_S_NODE_83395_length_163_cov_1.661538_g82909_i0 PRJNA680334 83395 163 1.661538 2.70830694 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 156 1.01e-33   NTclustered gi|1002441404|ref|XM_015806059.1| 157538 g82909 i0 85.906 7.74846625766871 149 17 90 4 3 149 70 216 Leptomonas pyrrhocoris putative mitochondrial 40s ribosomal protein S15a mRNA blastn 1263 156 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
24121249 24121249 PRJNA680334_S_NODE_54699_length_186_cov_5.366013_g54213_i0 PRJNA680334 54699 186 5.366013 9.98078418 Trypanosoma 5690 Euglenozoa other_Eukaryota 305 1.11e-78   NTclustered gi|62175522|gb|AC159414.1| 5691 g54213 i0 96.721 139.602150537634 183 6 98 0 1 183 64982 65164 Trypanosoma brucei chromosome 3 clone RPCI93-25B21, complete sequence blastn 25966 305 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;