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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA675638" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 18 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675638 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
648454 648454 PRJNA675638_P_NODE_20061_length_164_cov_0.886957_g19864_i0 PRJNA675638 20061 164 0.886957 1.45460948 Cladosporium halotolerans 1052096 Fungi Fungi 193 7.73e-45   NTclustered gi|2837719752|ref|XM_069368798.1| 1052096 g19864 i0 87.879 1.00609756097561 165 18 100 2 1 164 447 284 Cladosporium halotolerans uncharacterized protein (WHR41_00192), mRNA blastn 165 193 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
1168993 1168993 PRJNA675638_S_NODE_6221_length_182_cov_1.308271_g6159_i0 PRJNA675638 6221 182 1.308271 2.38105322 Pleosporaceae 28556 Fungi Fungi 337 3.82e-88   NTclustered gi|1888322|gb|U43465.1|LIU43465 45303 g6159 i0 100 100 182 0 100 0 1 182 101 282 Lewia infectoria small subunit nuclear ribosomal RNA gene, partial sequence blastn 18200 337 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria infectoria
4997294 4997294 PRJNA675638_P_NODE_18164_length_167_cov_0.864407_g17967_i0 PRJNA675638 18164 167 0.864407 1.44355969 Botrytis 33196 Fungi Fungi 99 1.77e-16   NTclustered gi|1955460549|ref|XM_038902033.1| 1463999 g17967 i0 95.161 2.86826347305389 62 3 37 0 1 62 575 636 Botrytis sinoallii uncharacterized protein (EAF02_005985), partial mRNA blastn 479 99 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis sinoallii
6272873 6272873 PRJNA675638_P_NODE_17105_length_173_cov_1.209677_g16908_i0 PRJNA675638 17105 173 1.209677 2.09274121 root 1 Root_unresolved Root_unresolved 320 3.61e-83   NTclustered gi|1473255798|gb|MH868742.1| 5074 g16908 i0 100 100 173 0 100 0 1 173 138 310 Penicillium brevicompactum culture CBS:287.53 strain CBS 287.53 large subunit ribosomal RNA gene, partial sequence blastn 17300 320 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium brevicompactum
6272913 6272913 PRJNA675638_P_NODE_5425_length_291_cov_1.433884_g5228_i0 PRJNA675638 5425 291 1.433884 4.17260244 Pleosporaceae 28556 Fungi Fungi 527 3.67e-145   NTclustered gi|1783384436|gb|MN818598.1| 5503 g5228 i0 99.313 99.9656357388316 291 2 100 0 1 291 666 376 Curvularia lunata isolate Cu-36 large subunit ribosomal RNA gene, partial sequence blastn 29090 527 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Curvularia Curvularia lunata
7546852 7546852 PRJNA675638_P_NODE_17746_length_169_cov_1.275000_g17549_i0 PRJNA675638 17746 169 1.275 2.15475 Coniochaeta 79808 Fungi Fungi 307 2.73e-79   NTclustered gi|1333183594|gb|MG491499.1| 91930 g17549 i0 99.412 104.597633136095 170 0 100 1 1 169 3800 3969 Coniochaeta hoffmannii strain CBS 245.38 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence; and 28S-18S intergenic spacer, partial sequence blastn 17677 307 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Coniochaetales Coniochaetaceae Coniochaeta Coniochaeta hoffmannii
8821976 8821976 PRJNA675638_P_NODE_6147_length_276_cov_1.480176_g5950_i0 PRJNA675638 6147 276 1.480176 4.08528576 Ascomycota 4890 Fungi Fungi 494 3.51e-135   NTclustered gi|2749640508|ref|XR_010715598.1| 5022 g5950 i0 98.917 112.561594202899 277 2 100 1 1 276 1900 2176 Leptosphaeria maculans 28S ribosomal RNA (IAQ61_009836), rRNA blastn 31067 494 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus lingam
12127889 12127889 PRJNA675638_S_NODE_2230_length_290_cov_4.937759_g2168_i0 PRJNA675638 2230 290 4.937759 14.3195011 Botrytis fragariae 1964551 Fungi Fungi 52.8 0.027   NTclustered gi|1929730052|ref|XM_037337055.1| 1964551 g2168 i0 100 0.096551724137931 28 0 10 0 32 59 1249 1276 Botrytis fragariae putative cell surface protein (Bfra_006685), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Helotiales Sclerotiniaceae Botrytis Botrytis fragariae
13402639 13402639 PRJNA675638_S_NODE_511_length_923_cov_35.327231_g416_i1 PRJNA675638 511 923 35.327231 326.07034213 Leptographium clavigerum 226899 Fungi Fungi 56.5 0.007   NTclustered gi|930148321|ref|XM_014319092.1| 655863 g416 i1 100 0.535211267605634 30 0 3 0 892 921 72 101 Grosmannia clavigera kw1407 glycoside hydrolase family 16 (CMQ_5347), partial mRNA blastn 494 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Ophiostomatales Ophiostomataceae Leptographium Leptographium clavigerum
15951247 15951247 PRJNA675638_P_NODE_18913_length_166_cov_0.871795_g18716_i0 PRJNA675638 18913 166 0.871795 1.4471797 Phialemonium atrogriseum 1093897 Fungi Fungi 137 3.73e-28   NTclustered gi|2607487150|ref|XM_060426618.1| 1093897 g18716 i0 81.988 1.74698795180723 161 29 97 0 1 161 385 545 Phialemonium atrogriseum translation initiation factor 2, alpha subunit (QBC33DRAFT_523277), mRNA blastn 290 137 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Cephalothecales Cephalothecaceae Phialemonium Phialemonium atrogriseum
18500842 18500842 PRJNA675638_P_NODE_7915_length_245_cov_2.265306_g7718_i0 PRJNA675638 7915 245 2.265306 5.5499997 Ascoidea rubescens 54195 Fungi Fungi 52.8 0.022   NTclustered gi|1147183483|ref|XM_020189082.1| 1344418 g7718 i0 100 0.114285714285714 28 0 11 0 169 196 1265 1238 Ascoidea rubescens DSM 1968 uncharacterized protein (ASCRUDRAFT_134822), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Ascoideales Ascoideaceae Ascoidea Ascoidea rubescens
19020666 19020666 PRJNA675638_P_NODE_10495_length_217_cov_1.196429_g10298_i0 PRJNA675638 10495 217 1.196429 2.59625093 Alternaria 5598 Fungi Fungi 390 3.579999999999999e-104   NTclustered gi|670734121|gb|KJ443121.1| 1525331 g10298 i0 99.078 116.041474654378 217 2 100 0 1 217 1813 2029 Alternaria sp. M301 28S large subunit ribosomal RNA gene, partial sequence blastn 25181 390 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria sp. M301
21571098 21571098 PRJNA675638_P_NODE_12237_length_203_cov_1.766234_g12040_i0 PRJNA675638 12237 203 1.766234 3.58545502 Dothideomycetes 147541 Fungi Fungi 359 9.31e-95   NTclustered gi|2791117515|gb|PQ217832.1| 5599 g12040 i0 98.522 101.399014778325 203 3 100 0 1 203 5350 5552 Alternaria alternata isolate Karbala-1 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and external transcribed spacer, partial sequence blastn 20584 359 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
21571169 21571169 PRJNA675638_P_NODE_6197_length_275_cov_1.384956_g6000_i0 PRJNA675638 6197 275 1.384956 3.808629 Eukaryota 2759 Fungi Fungi 455 1.65e-123   NTclustered gi|949172902|gb|KT263458.1| 1750757 g6000 i0 96.39 100.730909090909 277 8 100 2 1 275 945 669 Capnodiales sp. A545 large subunit ribosomal RNA gene, partial sequence blastn 27701 455 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Capnodiales     Capnodiales sp. A545
21571199 21571199 PRJNA675638_S_NODE_7357_length_169_cov_0.833333_g7295_i0 PRJNA675638 7357 169 0.833333 1.40833277 root 1 Root_unresolved Root_unresolved 307 2.73e-79   NTclustered gi|1275558205|ref|NG_055690.1| 4931 g7295 i0 99.408 112.846153846154 169 1 100 0 1 169 1387 1555 Saccharomyces bayanus NRRL Y-12624 28S rRNA gene, partial sequence; from TYPE material blastn 19071 307 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces bayanus
22846343 22846343 PRJNA675638_P_NODE_13318_length_196_cov_0.965986_g13121_i0 PRJNA675638 13318 196 0.965986 1.89333256 Fungi 4751 Fungi Fungi 363 6.899999999999998e-96   NTclustered gi|2195309747|gb|OM736062.1| 5599 g13121 i0 100 100 196 0 100 0 1 196 241 46 Alternaria alternata strain BJ106.4 small subunit ribosomal RNA gene, partial sequence blastn 19600 363 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
22846364 22846364 PRJNA675638_P_NODE_18378_length_167_cov_0.864407_g18181_i0 PRJNA675638 18378 167 0.864407 1.44355969 Saccharomyces 4930 Fungi Fungi 309 7.53e-80   NTclustered gi|1389182097|gb|CP029160.1| 4932 g18181 i0 100 7.97604790419162 167 0 100 0 1 167 5097530 5097364 Saccharomyces cerevisiae strain SY14 chromosome I, complete sequence blastn 1332 309 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces cerevisiae
22846426 22846426 PRJNA675638_S_NODE_4938_length_203_cov_0.824675_g4876_i0 PRJNA675638 4938 203 0.824675 1.67409025 Cladosporium 5498 Fungi Fungi 313 7.3499999999999995e-81   NTclustered gi|169894415|gb|EU343558.1| 29918 g4876 i0 94.581 100.004926108374 203 9 99 2 1 202 86 287 Davidiella tassiana clone k104-5 large subunit ribosomal RNA gene, partial sequence blastn 20301 313 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium herbarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;