contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA675331" and tax_phylum = "Tubulinea"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 647650 | 647650 | PRJNA675331_P_NODE_15381_length_269_cov_1.178571_g15209_i0 | PRJNA675331 | 15381 | 269 | 1.178571 | 3.17035599 | Saccamoeba lacustris | 704142 | Tubulinea | other_Eukaryota | 300 | 7.97e-77 | NTclustered | gi|423292025|gb|JQ519458.1| | 704142 | g15209 | i0 | 86.891 | 91.0631970260223 | 267 | 35 | 99 | 0 | 3 | 269 | 678 | 412 | Saccamoeba lacustris clone JG10.115_b9 actin gene, partial cds | blastn | 24496 | 300 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba lacustris | ||
| 3198690 | 3198690 | PRJNA675331_P_NODE_2843_length_552_cov_1.102296_g2675_i0 | PRJNA675331 | 2843 | 552 | 1.102296 | 6.08467392 | Rhizamoeba saxonica | 200886 | Tubulinea | other_Eukaryota | 695 | 0 | NTclustered | gi|423292021|gb|JQ519456.1| | 200886 | g2675 | i0 | 89.512 | 94.2989130434783 | 553 | 52 | 99 | 5 | 3 | 552 | 204 | 753 | Rhizamoeba saxonica clone JG10.147_g3 actin gene, partial cds | blastn | 52053 | 695 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Leptomyxida | Flabellulidae | Rhizamoeba | Rhizamoeba saxonica | ||
| 4475739 | 4475739 | PRJNA675331_P_NODE_15984_length_265_cov_0.989583_g15812_i0 | PRJNA675331 | 15984 | 265 | 0.989583 | 2.62239495 | Ptolemeba noxubium | 1525730 | Tubulinea | other_Eukaryota | 436 | 5.719999999999999e-118 | NTclustered | gi|667752760|gb|KJ542109.1| | 1525730 | g15812 | i0 | 97.276 | 93.6301886792453 | 257 | 7 | 97 | 0 | 1 | 257 | 1411 | 1155 | Ptolemeba noxubium isolate Nx13-1a 18S ribosomal RNA gene, partial sequence | blastn | 24812 | 436 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Ptolemeba | Ptolemeba noxubium | ||
| 5751318 | 5751318 | PRJNA675331_P_NODE_21105_length_246_cov_0.890173_g20933_i0 | PRJNA675331 | 21105 | 246 | 0.890173 | 2.18982558 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 316 | 7.14e-82 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g20933 | i0 | 89.837 | 1 | 246 | 25 | 100 | 0 | 1 | 246 | 1365 | 1120 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 246 | 316 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 8301136 | 8301136 | PRJNA675331_P_NODE_5927_length_394_cov_5.831776_g5755_i0 | PRJNA675331 | 5927 | 394 | 5.831776 | 22.97719744 | Rhizamoeba saxonica | 200886 | Tubulinea | other_Eukaryota | 169 | 3.59e-37 | NTclustered | gi|300078497|gb|GU001159.1| | 200886 | g5755 | i0 | 87.671 | 10.5203045685279 | 146 | 16 | 37 | 2 | 19 | 162 | 4165 | 4310 | Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence | blastn | 4145 | 169 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Leptomyxida | Flabellulidae | Rhizamoeba | Rhizamoeba saxonica | ||
| 13401828 | 13401828 | PRJNA675331_P_NODE_17031_length_257_cov_1.842391_g16859_i0 | PRJNA675331 | 17031 | 257 | 1.842391 | 4.73494487 | Ptolemeba noxubium | 1525730 | Tubulinea | other_Eukaryota | 448 | 2.5499999999999995e-121 | NTclustered | gi|667752761|gb|KJ542110.1| | 1525730 | g16859 | i0 | 98.054 | 70.136186770428 | 257 | 5 | 100 | 0 | 1 | 257 | 1383 | 1127 | Ptolemeba noxubium isolate Nx13-1c 18S ribosomal RNA gene, partial sequence | blastn | 18025 | 448 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Ptolemeba | Ptolemeba noxubium | ||
| 13401869 | 13401869 | PRJNA675331_P_NODE_471_length_1269_cov_2.233278_g376_i0 | PRJNA675331 | 471 | 1269 | 2.233278 | 28.34029782 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1216 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g376 | i0 | 84.294 | 36.1694247438928 | 1267 | 176 | 99 | 18 | 19 | 1269 | 1 | 1260 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 45899 | 1216 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 13401876 | 13401876 | PRJNA675331_P_NODE_6971_length_367_cov_1.047619_g6799_i0 | PRJNA675331 | 6971 | 367 | 1.047619 | 3.84476173 | uncultured Saccamoeba | 2590465 | Tubulinea | other_Eukaryota | 388 | 2.3399999999999996e-103 | NTclustered | gi|1691659396|gb|MN097065.1| | 2590465 | g6799 | i0 | 94.466 | 81.1553133514986 | 253 | 12 | 68 | 2 | 4 | 254 | 107 | 359 | Uncultured Saccamoeba clone OTU343 small subunit ribosomal RNA gene, partial sequence | blastn | 29784 | 388 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | uncultured Saccamoeba | |||
| 15950526 | 15950526 | PRJNA675331_P_NODE_4513_length_447_cov_0.925134_g4341_i0 | PRJNA675331 | 4513 | 447 | 0.925134 | 4.13534898 | Rhizamoeba saxonica | 200886 | Tubulinea | other_Eukaryota | 592 | 2.06e-164 | NTclustered | gi|423292021|gb|JQ519456.1| | 200886 | g4341 | i0 | 90.583 | 95.592841163311 | 446 | 42 | 99 | 0 | 2 | 447 | 580 | 135 | Rhizamoeba saxonica clone JG10.147_g3 actin gene, partial cds | blastn | 42730 | 592 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Leptomyxida | Flabellulidae | Rhizamoeba | Rhizamoeba saxonica | ||
| 15950528 | 15950528 | PRJNA675331_P_NODE_473_length_1268_cov_2.015063_g376_i1 | PRJNA675331 | 473 | 1268 | 2.015063 | 25.55099884 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1221 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g376 | i1 | 84.373 | 33.6648264984227 | 1267 | 175 | 99 | 18 | 18 | 1268 | 1 | 1260 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 42687 | 1221 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 17225819 | 17225819 | PRJNA675331_P_NODE_2234_length_614_cov_6.900185_g2068_i0 | PRJNA675331 | 2234 | 614 | 6.900185 | 42.3671359 | Copromyxa microcystidis | 1678070 | Tubulinea | other_Eukaryota | 1085 | 0 | NTclustered | gi|861553842|gb|KP719188.1| | 1678070 | g2068 | i0 | 98.537 | 74.4104234527687 | 615 | 8 | 100 | 1 | 1 | 614 | 743 | 129 | Copromyxa microcystidis strain A2JEPDK small subunit ribosomal RNA gene, partial sequence | blastn | 45688 | 1085 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa microcystidis | ||
| 18500037 | 18500037 | PRJNA675331_P_NODE_22495_length_243_cov_2.417647_g22323_i0 | PRJNA675331 | 22495 | 243 | 2.417647 | 5.87488221 | Ptolemeba noxubium | 1525730 | Tubulinea | other_Eukaryota | 340 | 4.169999999999999e-89 | NTclustered | gi|667752760|gb|KJ542109.1| | 1525730 | g22323 | i0 | 92.116 | 43.3086419753086 | 241 | 19 | 99 | 0 | 1 | 241 | 12 | 252 | Ptolemeba noxubium isolate Nx13-1a 18S ribosomal RNA gene, partial sequence | blastn | 10524 | 340 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Ptolemeba | Ptolemeba noxubium | ||
| 19774611 | 19774611 | PRJNA675331_P_NODE_16756_length_259_cov_2.483871_g16584_i0 | PRJNA675331 | 16756 | 259 | 2.483871 | 6.43322589 | Copromyxa flindersi | 3050410 | Tubulinea | other_Eukaryota | 479 | 9.13e-131 | NTclustered | gi|2513086415|gb|OR081327.1| | 3050410 | g16584 | i0 | 100 | 83.7876447876448 | 259 | 0 | 100 | 0 | 1 | 259 | 712 | 970 | Copromyxa flindersi strain KI4.1.H5.3 small subunit ribosomal RNA gene, partial sequence | blastn | 21701 | 479 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa flindersi | ||
| 21050226 | 21050226 | PRJNA675331_P_NODE_11357_length_299_cov_1.075221_g11185_i0 | PRJNA675331 | 11357 | 299 | 1.075221 | 3.21491079 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 315 | 3.21e-81 | NTclustered | gi|423291982|gb|JQ519436.1| | 5778 | g11185 | i0 | 86.007 | 97.3779264214047 | 293 | 41 | 98 | 0 | 7 | 299 | 32 | 324 | Vermamoeba vermiformis clone JG10.95_g4 actin gene, partial cds | blastn | 29116 | 315 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 22325152 | 22325152 | PRJNA675331_P_NODE_21098_length_246_cov_0.890173_g20926_i0 | PRJNA675331 | 21098 | 246 | 0.890173 | 2.18982558 | Saccamoeba lacustris | 704142 | Tubulinea | other_Eukaryota | 348 | 2.53e-91 | NTclustered | gi|423292023|gb|JQ519457.1| | 704142 | g20926 | i0 | 93.22 | 99.650406504065 | 236 | 16 | 96 | 0 | 11 | 246 | 255 | 20 | Saccamoeba lacustris clone JG10.115_a9 actin gene, partial cds | blastn | 24514 | 348 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba lacustris | ||
| 22325177 | 22325177 | PRJNA675331_P_NODE_358_length_1437_cov_7.412757_g274_i0 | PRJNA675331 | 358 | 1437 | 7.412757 | 106.52131809 | Copromyxa protea | 931554 | Tubulinea | other_Eukaryota | 1485 | 0 | NTclustered | gi|508737347|dbj|AB766053.1| | 931554 | g274 | i0 | 86.155 | 48.0932498260264 | 1394 | 171 | 96 | 13 | 27 | 1400 | 1 | 1392 | Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 | blastn | 69110 | 1485 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Copromyxa | Copromyxa protea | ||
| 23600519 | 23600519 | PRJNA675331_P_NODE_13979_length_276_cov_1.133005_g13807_i0 | PRJNA675331 | 13979 | 276 | 1.133005 | 3.1270938 | Saccamoeba sp. DP7 | 1215623 | Tubulinea | other_Eukaryota | 370 | 6.17e-98 | NTclustered | gi|399764206|gb|JQ271717.1| | 1215623 | g13807 | i0 | 93.878 | 81.9746376811594 | 245 | 15 | 89 | 0 | 32 | 276 | 1692 | 1448 | Saccamoeba sp. DP7 18S ribosomal RNA gene, partial sequence | blastn | 22625 | 370 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Saccamoeba | Saccamoeba sp. DP7 | ||
| 23600571 | 23600571 | PRJNA675331_P_NODE_2059_length_639_cov_2.102473_g1893_i0 | PRJNA675331 | 2059 | 639 | 2.102473 | 13.43480247 | Hartmannella cantabrigiensis | 239731 | Tubulinea | other_Eukaryota | 411 | 9.089999999999998e-110 | NTclustered | gi|1042160947|dbj|LC102280.1| | 239731 | g1893 | i0 | 88.724 | 5.34428794992175 | 337 | 36 | 53 | 2 | 304 | 639 | 1 | 336 | Hartmannella cantabrigiensis gene for elongation factor 2 alpha, partial cds, strain: ALC3 | blastn | 3415 | 411 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Hartmannella | Hartmannella cantabrigiensis | ||
| 23600587 | 23600587 | PRJNA675331_P_NODE_2379_length_600_cov_1.743833_g2213_i0 | PRJNA675331 | 2379 | 600 | 1.743833 | 10.462998 | Glaeseria mira | 242547 | Tubulinea | other_Eukaryota | 549 | 1.73e-151 | NTclustered | gi|33946339|gb|AY294146.1| | 242547 | g2213 | i0 | 89.791 | 71.5516666666667 | 431 | 40 | 80 | 4 | 170 | 600 | 802 | 1228 | Glaeseria mira small subunit ribosomal RNA gene, partial sequence | blastn | 42931 | 549 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Hartmannellidae | Glaeseria | Glaeseria mira |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;