RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA675331" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675331 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
647692 647692 PRJNA675331_P_NODE_24581_length_226_cov_2.928105_g24409_i0 PRJNA675331 24581 226 2.928105 6.6175173 Vittaforma corneae 42399 Fungi Fungi 150 6.93e-32   NTclustered gi|667639983|ref|XR_552275.1| 993615 g24409 i0 82.857 27.8185840707965 175 22 76 6 1 172 2192 2361 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 6287 150 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
4475705 4475705 PRJNA675331_P_NODE_12504_length_288_cov_1.065116_g12332_i0 PRJNA675331 12504 288 1.065116 3.06753408 Vittaforma corneae 42399 Fungi Fungi 416 8.2e-112   NTclustered gi|667639983|ref|XR_552275.1| 993615 g12332 i0 92.708 46.7951388888889 288 21 100 0 1 288 1742 2029 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 13477 416 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae
5751355 5751355 PRJNA675331_P_NODE_5945_length_394_cov_1.299065_g5773_i0 PRJNA675331 5945 394 1.299065 5.1183161 Crispospora chironomi 856671 Fungi Fungi 693 0   NTclustered gi|298919556|gb|GU130407.1| 856671 g5773 i0 98.718 81.2791878172589 390 5 99 0 3 392 837 1226 Crispospora chironomi small subunit ribosomal RNA gene, partial sequence blastn 32024 693 1 Eukaryota Opisthokonta Fungi Microsporidia       Crispospora Crispospora chironomi
10097209 10097209 PRJNA675331_P_NODE_268_length_1637_cov_5.282609_g202_i0 PRJNA675331 268 1637 5.282609 86.47630933 Eukaryota 2759 Fungi Fungi 712 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g202 i0 84.765 15.0048869883934 722 96 93 13 1 714 1753 2468 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 24563 712 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
15950531 15950531 PRJNA675331_P_NODE_493_length_1246_cov_2.297528_g394_i0 PRJNA675331 493 1246 2.297528 28.62719888 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 1485 0   NTclustered gi|2522768008|gb|OR162445.1| 646526 g394 i0 89.316 93.400481540931 1198 109 100 14 60 1246 1269 80 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 116377 1485 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
18500061 18500061 PRJNA675331_P_NODE_5035_length_426_cov_1.082153_g4863_i0 PRJNA675331 5035 426 1.082153 4.60997178 Vittaforma corneae 42399 Fungi Fungi 497 4.39e-136   NTclustered gi|667639983|ref|XR_552275.1| 993615 g4863 i0 88.095 10.9154929577465 420 48 99 2 7 426 720 303 Vittaforma corneae ATCC 50505 28S ribosomal RNA (VICG_02297), rRNA blastn 4650 497 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vittaforma Vittaforma corneae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;