RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA675331" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA675331 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3198710 3198710 PRJNA675331_P_NODE_6403_length_381_cov_1.000000_g6231_i0 PRJNA675331 6403 381 1 3.81 Stylophora pistillata 50429 Cnidaria other_Eukaryota 71.3 1e-7   NTclustered gi|1270073771|ref|XM_022944138.1| 50429 g6231 i0 86.154 1.68766404199475 65 9 17 0 128 192 1043 979 PREDICTED: Stylophora pistillata luc7-like protein 3 (LOC111337776), mRNA blastn 643 71.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
10097213 10097213 PRJNA675331_P_NODE_5728_length_401_cov_1.378049_g5556_i0 PRJNA675331 5728 401 1.378049 5.52597649 Metazoa 33208 Cnidaria other_Eukaryota 291 7.48e-74   NTclustered gi|1778029874|ref|XM_031696318.1| 6105 g5556 i0 82.216 85.3615960099751 343 56 85 3 7 347 377 38 PREDICTED: Actinia tenebrosa histone H2A-like (LOC116289406), mRNA blastn 34230 291 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Actinia Actinia tenebrosa
14676799 14676799 PRJNA675331_P_NODE_13192_length_281_cov_1.850962_g13020_i0 PRJNA675331 13192 281 1.850962 5.20120322 Exaiptasia diaphana 2652724 Cnidaria other_Eukaryota 237 6.66e-58   NTclustered gi|1619665138|ref|XM_021050033.2| 2652724 g13020 i0 83.142 54.3807829181495 261 42 93 2 1 260 178 437 PREDICTED: Exaiptasia diaphana serine/threonine-protein phosphatase PP1-beta catalytic subunit (LOC110243880), mRNA blastn 15281 237 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Aiptasiidae Exaiptasia Exaiptasia diaphana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;