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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA675331" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJNA675331 · 29 ✖

analysis 1

  • blastn · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
647650 647650 PRJNA675331_P_NODE_15381_length_269_cov_1.178571_g15209_i0 PRJNA675331 15381 269 1.178571 3.17035599 Saccamoeba lacustris 704142 Tubulinea other_Eukaryota 300 7.97e-77   NTclustered gi|423292025|gb|JQ519458.1| 704142 g15209 i0 86.891 91.0631970260223 267 35 99 0 3 269 678 412 Saccamoeba lacustris clone JG10.115_b9 actin gene, partial cds blastn 24496 300 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba lacustris
1923899 1923899 PRJNA675331_P_NODE_3522_length_499_cov_2.377934_g3351_i0 PRJNA675331 3522 499 2.377934 11.86589066 Dictyostelium discoideum 44689 Evosea other_Eukaryota 575 2.3399999999999996e-159   NTclustered gi|66821302|ref|XM_639054.1| 352472 g3351 i0 87.959 98.4428857715431 490 56 98 3 1 488 390 878 Dictyostelium discoideum AX4 hypothetical protein (act9) mRNA, complete cds blastn 49123 575 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
3198690 3198690 PRJNA675331_P_NODE_2843_length_552_cov_1.102296_g2675_i0 PRJNA675331 2843 552 1.102296 6.08467392 Rhizamoeba saxonica 200886 Tubulinea other_Eukaryota 695 0   NTclustered gi|423292021|gb|JQ519456.1| 200886 g2675 i0 89.512 94.2989130434783 553 52 99 5 3 552 204 753 Rhizamoeba saxonica clone JG10.147_g3 actin gene, partial cds blastn 52053 695 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
3198720 3198720 PRJNA675331_P_NODE_8943_length_329_cov_2.093750_g8771_i0 PRJNA675331 8943 329 2.09375 6.8884375 Paramoeba branchiphila 308475 Discosea other_Eukaryota 411 4.429999999999999e-110   NTclustered gi|226347442|gb|FJ807261.1| 308475 g8771 i0 89.091 100.392097264438 330 34 100 2 1 329 690 1018 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 33029 411 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
3720193 3720193 PRJNA675331_P_NODE_11103_length_302_cov_1.192140_g10931_i0 PRJNA675331 11103 302 1.19214 3.6002628 Eumycetozoa 142796 Evosea other_Eukaryota 215 3.39e-51   NTclustered gi|66800824|ref|XM_629336.1| 352472 g10931 i0 79.801 12.3245033112583 302 55 99 6 1 299 32 330 Dictyostelium discoideum AX4 Ras GTPase (rasD) mRNA, complete cds blastn 3722 215 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
4475739 4475739 PRJNA675331_P_NODE_15984_length_265_cov_0.989583_g15812_i0 PRJNA675331 15984 265 0.989583 2.62239495 Ptolemeba noxubium 1525730 Tubulinea other_Eukaryota 436 5.719999999999999e-118   NTclustered gi|667752760|gb|KJ542109.1| 1525730 g15812 i0 97.276 93.6301886792453 257 7 97 0 1 257 1411 1155 Ptolemeba noxubium isolate Nx13-1a 18S ribosomal RNA gene, partial sequence blastn 24812 436 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Ptolemeba Ptolemeba noxubium
4475808 4475808 PRJNA675331_P_NODE_7404_length_357_cov_1.626761_g7232_i0 PRJNA675331 7404 357 1.626761 5.80753677 Dictyostelium purpureum 5786 Evosea other_Eukaryota 193 1.91e-44   NTclustered gi|330845015|ref|XM_003294352.1| 5786 g7232 i0 82.949 8.97478991596639 217 34 61 3 80 295 553 767 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_51485), mRNA blastn 3204 193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5751318 5751318 PRJNA675331_P_NODE_21105_length_246_cov_0.890173_g20933_i0 PRJNA675331 21105 246 0.890173 2.18982558 Copromyxa protea 931554 Tubulinea other_Eukaryota 316 7.14e-82   NTclustered gi|508737347|dbj|AB766053.1| 931554 g20933 i0 89.837 1 246 25 100 0 1 246 1365 1120 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 246 316 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
7026340 7026340 PRJNA675331_P_NODE_13126_length_282_cov_1.105263_g12954_i0 PRJNA675331 13126 282 1.105263 3.11684166 Paramoeba perurans 437603 Discosea other_Eukaryota 274 5.1e-69   NTclustered gi|2048770422|gb|MW534135.1| 437603 g12954 i0 84.982 2.41489361702128 273 37 96 4 7 277 332 602 Paramoeba perurans isolate PPER_00019895 multifunctional chaperone mRNA, complete cds blastn 681 274 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
8301035 8301035 PRJNA675331_P_NODE_10987_length_303_cov_1.608696_g10815_i0 PRJNA675331 10987 303 1.608696 4.87434888 Paramoeba branchiphila 308475 Discosea other_Eukaryota 307 5.46e-79   NTclustered gi|226347442|gb|FJ807261.1| 308475 g10815 i0 85.05 92.4455445544555 301 45 99 0 3 303 693 393 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 28011 307 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
8301136 8301136 PRJNA675331_P_NODE_5927_length_394_cov_5.831776_g5755_i0 PRJNA675331 5927 394 5.831776 22.97719744 Rhizamoeba saxonica 200886 Tubulinea other_Eukaryota 169 3.59e-37   NTclustered gi|300078497|gb|GU001159.1| 200886 g5755 i0 87.671 10.5203045685279 146 16 37 2 19 162 4165 4310 Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4145 169 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
13401783 13401783 PRJNA675331_P_NODE_10771_length_306_cov_0.991416_g10599_i0 PRJNA675331 10771 306 0.991416 3.03373296 Cavenderia fasciculata 261658 Evosea other_Eukaryota 189 2.08e-43   NTclustered gi|470240985|ref|XM_004354438.1| 261658 g10599 i0 77.994 4.22222222222222 309 62 100 6 1 306 891 1196 Cavenderia fasciculata S-adenosyl-L-homocysteine hydrolase (sahA), partial mRNA blastn 1292 189 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
13401828 13401828 PRJNA675331_P_NODE_17031_length_257_cov_1.842391_g16859_i0 PRJNA675331 17031 257 1.842391 4.73494487 Ptolemeba noxubium 1525730 Tubulinea other_Eukaryota 448 2.5499999999999995e-121   NTclustered gi|667752761|gb|KJ542110.1| 1525730 g16859 i0 98.054 70.136186770428 257 5 100 0 1 257 1383 1127 Ptolemeba noxubium isolate Nx13-1c 18S ribosomal RNA gene, partial sequence blastn 18025 448 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Ptolemeba Ptolemeba noxubium
13401869 13401869 PRJNA675331_P_NODE_471_length_1269_cov_2.233278_g376_i0 PRJNA675331 471 1269 2.233278 28.34029782 Copromyxa protea 931554 Tubulinea other_Eukaryota 1216 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g376 i0 84.294 36.1694247438928 1267 176 99 18 19 1269 1 1260 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 45899 1216 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
13401876 13401876 PRJNA675331_P_NODE_6971_length_367_cov_1.047619_g6799_i0 PRJNA675331 6971 367 1.047619 3.84476173 uncultured Saccamoeba 2590465 Tubulinea other_Eukaryota 388 2.3399999999999996e-103   NTclustered gi|1691659396|gb|MN097065.1| 2590465 g6799 i0 94.466 81.1553133514986 253 12 68 2 4 254 107 359 Uncultured Saccamoeba clone OTU343 small subunit ribosomal RNA gene, partial sequence blastn 29784 388 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae   uncultured Saccamoeba
15950526 15950526 PRJNA675331_P_NODE_4513_length_447_cov_0.925134_g4341_i0 PRJNA675331 4513 447 0.925134 4.13534898 Rhizamoeba saxonica 200886 Tubulinea other_Eukaryota 592 2.06e-164   NTclustered gi|423292021|gb|JQ519456.1| 200886 g4341 i0 90.583 95.592841163311 446 42 99 0 2 447 580 135 Rhizamoeba saxonica clone JG10.147_g3 actin gene, partial cds blastn 42730 592 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
15950528 15950528 PRJNA675331_P_NODE_473_length_1268_cov_2.015063_g376_i1 PRJNA675331 473 1268 2.015063 25.55099884 Copromyxa protea 931554 Tubulinea other_Eukaryota 1221 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g376 i1 84.373 33.6648264984227 1267 175 99 18 18 1268 1 1260 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 42687 1221 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
17225819 17225819 PRJNA675331_P_NODE_2234_length_614_cov_6.900185_g2068_i0 PRJNA675331 2234 614 6.900185 42.3671359 Copromyxa microcystidis 1678070 Tubulinea other_Eukaryota 1085 0   NTclustered gi|861553842|gb|KP719188.1| 1678070 g2068 i0 98.537 74.4104234527687 615 8 100 1 1 614 743 129 Copromyxa microcystidis strain A2JEPDK small subunit ribosomal RNA gene, partial sequence blastn 45688 1085 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa microcystidis
18500037 18500037 PRJNA675331_P_NODE_22495_length_243_cov_2.417647_g22323_i0 PRJNA675331 22495 243 2.417647 5.87488221 Ptolemeba noxubium 1525730 Tubulinea other_Eukaryota 340 4.169999999999999e-89   NTclustered gi|667752760|gb|KJ542109.1| 1525730 g22323 i0 92.116 43.3086419753086 241 19 99 0 1 241 12 252 Ptolemeba noxubium isolate Nx13-1a 18S ribosomal RNA gene, partial sequence blastn 10524 340 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Ptolemeba Ptolemeba noxubium
18500077 18500077 PRJNA675331_P_NODE_8015_length_345_cov_1.830882_g7843_i0 PRJNA675331 8015 345 1.830882 6.3165429 Vexillifera multispinosa 1105342 Discosea other_Eukaryota 316 1.05e-81   NTclustered gi|354720322|gb|HQ687481.1| 1105342 g7843 i0 85.231 53.9130434782609 325 28 93 14 1 321 1788 1480 Vexillifera multispinosa strain P124 small subunit ribosomal RNA gene, partial sequence blastn 18600 316 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera multispinosa
19774611 19774611 PRJNA675331_P_NODE_16756_length_259_cov_2.483871_g16584_i0 PRJNA675331 16756 259 2.483871 6.43322589 Copromyxa flindersi 3050410 Tubulinea other_Eukaryota 479 9.13e-131   NTclustered gi|2513086415|gb|OR081327.1| 3050410 g16584 i0 100 83.7876447876448 259 0 100 0 1 259 712 970 Copromyxa flindersi strain KI4.1.H5.3 small subunit ribosomal RNA gene, partial sequence blastn 21701 479 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa flindersi
21050226 21050226 PRJNA675331_P_NODE_11357_length_299_cov_1.075221_g11185_i0 PRJNA675331 11357 299 1.075221 3.21491079 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 315 3.21e-81   NTclustered gi|423291982|gb|JQ519436.1| 5778 g11185 i0 86.007 97.3779264214047 293 41 98 0 7 299 32 324 Vermamoeba vermiformis clone JG10.95_g4 actin gene, partial cds blastn 29116 315 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
22325152 22325152 PRJNA675331_P_NODE_21098_length_246_cov_0.890173_g20926_i0 PRJNA675331 21098 246 0.890173 2.18982558 Saccamoeba lacustris 704142 Tubulinea other_Eukaryota 348 2.53e-91   NTclustered gi|423292023|gb|JQ519457.1| 704142 g20926 i0 93.22 99.650406504065 236 16 96 0 11 246 255 20 Saccamoeba lacustris clone JG10.115_a9 actin gene, partial cds blastn 24514 348 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba lacustris
22325177 22325177 PRJNA675331_P_NODE_358_length_1437_cov_7.412757_g274_i0 PRJNA675331 358 1437 7.412757 106.52131809 Copromyxa protea 931554 Tubulinea other_Eukaryota 1485 0   NTclustered gi|508737347|dbj|AB766053.1| 931554 g274 i0 86.155 48.0932498260264 1394 171 96 13 27 1400 1 1392 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 69110 1485 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
23600519 23600519 PRJNA675331_P_NODE_13979_length_276_cov_1.133005_g13807_i0 PRJNA675331 13979 276 1.133005 3.1270938 Saccamoeba sp. DP7 1215623 Tubulinea other_Eukaryota 370 6.17e-98   NTclustered gi|399764206|gb|JQ271717.1| 1215623 g13807 i0 93.878 81.9746376811594 245 15 89 0 32 276 1692 1448 Saccamoeba sp. DP7 18S ribosomal RNA gene, partial sequence blastn 22625 370 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba sp. DP7
23600561 23600561 PRJNA675331_P_NODE_17739_length_252_cov_2.083799_g17567_i0 PRJNA675331 17739 252 2.083799 5.25117348 Vexillifera expectata 1789827 Discosea other_Eukaryota 405 1.52e-108   NTclustered gi|1042160925|dbj|LC102269.1| 1789827 g17567 i0 95.635 99.3809523809524 252 11 100 0 1 252 350 99 Vexillifera expectata gene for actin, partial cds, strain: 4730_cl4 blastn 25044 405 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera expectata
23600571 23600571 PRJNA675331_P_NODE_2059_length_639_cov_2.102473_g1893_i0 PRJNA675331 2059 639 2.102473 13.43480247 Hartmannella cantabrigiensis 239731 Tubulinea other_Eukaryota 411 9.089999999999998e-110   NTclustered gi|1042160947|dbj|LC102280.1| 239731 g1893 i0 88.724 5.34428794992175 337 36 53 2 304 639 1 336 Hartmannella cantabrigiensis gene for elongation factor 2 alpha, partial cds, strain: ALC3 blastn 3415 411 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Hartmannella Hartmannella cantabrigiensis
23600587 23600587 PRJNA675331_P_NODE_2379_length_600_cov_1.743833_g2213_i0 PRJNA675331 2379 600 1.743833 10.462998 Glaeseria mira 242547 Tubulinea other_Eukaryota 549 1.73e-151   NTclustered gi|33946339|gb|AY294146.1| 242547 g2213 i0 89.791 71.5516666666667 431 40 80 4 170 600 802 1228 Glaeseria mira small subunit ribosomal RNA gene, partial sequence blastn 42931 549 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Glaeseria Glaeseria mira
24873883 24873883 PRJNA675331_P_NODE_17480_length_254_cov_1.530387_g17308_i0 PRJNA675331 17480 254 1.530387 3.88718298 Heterostelium album 2086695 Evosea other_Eukaryota 259 1.27e-64   NTclustered gi|1160557950|ref|XM_020575808.1| 670386 g17308 i0 85.317 132.629921259843 252 35 99 2 4 254 692 442 Polysphondylium pallidum PN500 ubiquitin (ubqI), partial mRNA blastn 33688 259 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;