contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA675042" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4474498 | 4474498 | PRJNA675042_P_NODE_175244_length_241_cov_0.916667_g174794_i0 | PRJNA675042 | 175244 | 241 | 0.916667 | 2.20916747 | Sphaerochaetaceae bacterium | 2791017 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|2621786375|emb|OY782833.1| | 2791017 | g174794 | i0 | 100 | 0.116182572614108 | 28 | 0 | 12 | 0 | 214 | 241 | 2996132 | 2996159 | MAG: Sphaerochaetaceae bacterium isolate 4316afa4-75a5-40cd-90fd-6a37d92e054f genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaetaceae bacterium | |||
| 7024458 | 7024458 | PRJNA675042_P_NODE_105366_length_251_cov_2.134831_g104916_i0 | PRJNA675042 | 105366 | 251 | 2.134831 | 5.35842581 | Treponema denticola | 158 | Bacteria | Bacteria | 368 | 1.99e-97 | NTclustered | gi|2265172126|gb|CP051522.1| | 158 | g104916 | i0 | 93.227 | 191.764940239044 | 251 | 16 | 100 | 1 | 1 | 251 | 513827 | 513578 | Treponema denticola strain OMZ 910 chromosome, complete genome | blastn | 48133 | 368 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 8820805 | 8820805 | PRJNA675042_P_NODE_118987_length_249_cov_1.511364_g118537_i0 | PRJNA675042 | 118987 | 249 | 1.511364 | 3.76329636 | Treponema | 157 | Bacteria | Bacteria | 409 | 1.16e-109 | NTclustered | gi|2586383|gb|AF023062.1|AF023062 | 67515 | g118537 | i0 | 96.386 | 101 | 249 | 8 | 100 | 1 | 1 | 249 | 404 | 651 | Treponema sp. I:M:G54 16S ribosomal RNA gene, complete sequence | blastn | 25149 | 411 | 0.995133819951338 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. I:M:G54 | ||
| 9576017 | 9576017 | PRJNA675042_P_NODE_77808_length_283_cov_1.466667_g77358_i0 | PRJNA675042 | 77808 | 283 | 1.466667 | 4.15066761 | Treponema denticola | 158 | Bacteria | Bacteria | 244 | 4.01e-60 | NTclustered | gi|2265193197|gb|CP058347.1| | 158 | g77358 | i0 | 83.271 | 137.985865724382 | 269 | 41 | 99 | 4 | 16 | 283 | 1664187 | 1663922 | Treponema denticola strain OKA3 chromosome, complete genome | blastn | 39050 | 244 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 10096442 | 10096442 | PRJNA675042_P_NODE_114788_length_250_cov_0.870056_g114338_i0 | PRJNA675042 | 114788 | 250 | 0.870056 | 2.17514 | Brachyspira | 29521 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2514086334|gb|CP098754.1| | 52584 | g114338 | i0 | 100 | 0.672 | 28 | 0 | 11 | 0 | 142 | 169 | 727614 | 727641 | Brachyspira pilosicoli strain MEI4028 chromosome, complete genome | blastn | 168 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Brachyspirales | Brachyspiraceae | Brachyspira | Brachyspira pilosicoli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;