RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA675042" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA675042 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10849969 10849969 PRJNA675042_P_NODE_119889_length_249_cov_0.875000_g119439_i0 PRJNA675042 119889 249 0.875 2.17875 Proboscivirus elephantidbeta1 3050273 Viruses Viruses 58.4 4.84e-4   NTclustered gi|1912085272|gb|MN366293.1| 759753 g119439 i0 84.127 0.506024096385542 63 6 24 3 145 203 7275 7213 Elephant endotheliotropic herpesvirus 1A isolate IP164 Muthanga2, partial genome blastn 126 58.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Proboscivirus Proboscivirus elephantidbeta1
21049971 21049971 PRJNA675042_P_NODE_79697_length_281_cov_1.192308_g79247_i0 PRJNA675042 79697 281 1.192308 3.35038548 Varicellovirus canidalpha1 3050251 Viruses Viruses 52.8 0.026   NTclustered gi|1953434698|gb|MW353127.1| 170325 g79247 i0 96.774 3.19928825622776 31 1 11 0 47 77 112790 112820 Canid alphaherpesvirus 1 strain ELAL-3, complete genome blastn 899 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus canidalpha1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;