RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA675042" and tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • ant, tsetse, mealybug, aphid, etc. endosymbionts · 7 ✖

bioproject 1

  • PRJNA675042 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4474325 4474325 PRJNA675042_P_NODE_159404_length_244_cov_0.900585_g158954_i0 PRJNA675042 159404 244 0.900585 2.1974274 Candidatus Stammera capleta 2608262 Bacteria Bacteria 54.7 0.006   NTclustered gi|1269271234|gb|CP024013.1| 2608262 g158954 i0 100 0.118852459016393 29 0 12 0 40 68 87912 87884 MAG: Candidatus Stammera capleta isolate NZ1215 chromosome, complete genome blastn 29 54.7 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
4474734 4474734 PRJNA675042_P_NODE_26804_length_384_cov_0.842444_g26354_i0 PRJNA675042 26804 384 0.842444 3.23498496 Candidatus Stammera capleta 2608262 Bacteria Bacteria 52.8 0.037   NTclustered gi|2688290515|gb|CP145599.1| 2608262 g26354 i0 100 0.0729166666666667 28 0 7 0 355 382 214949 214976 MAG: Candidatus Stammera capleta isolate JMMFINPP_1 chromosome blastn 28 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
5749849 5749849 PRJNA675042_P_NODE_153065_length_245_cov_0.895349_g152615_i0 PRJNA675042 153065 245 0.895349 2.19360505 Candidatus Stammera capleta 2608262 Bacteria Bacteria 54.7 0.006   NTclustered gi|1925240924|gb|CP043989.1| 2608262 g152615 i0 96.875 0.130612244897959 32 1 13 0 159 190 167324 167355 MAG: Candidatus Stammera capleta isolate 1 chromosome, complete genome blastn 32 54.7 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
5750106 5750106 PRJNA675042_P_NODE_176605_length_241_cov_0.916667_g176155_i0 PRJNA675042 176605 241 0.916667 2.20916747 Candidatus Stammera capleta 2608262 Bacteria Bacteria 52.8 0.022   NTclustered gi|2676815329|gb|CP144790.1| 2608262 g176155 i0 100 0.116182572614108 28 0 12 0 183 210 160324 160351 MAG: Candidatus Stammera capleta isolate JBPPEFJP chromosome blastn 28 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
9575762 9575762 PRJNA675042_P_NODE_56888_length_313_cov_0.962500_g56438_i0 PRJNA675042 56888 313 0.9625 3.012625 Candidatus Stammera capleta 2608262 Bacteria Bacteria 56.5 0.002   NTclustered gi|2676815298|gb|CP144780.1| 2608262 g56438 i0 100 0.0958466453674121 30 0 10 0 7 36 179486 179515 MAG: Candidatus Stammera capleta isolate OIKJJOHF chromosome blastn 30 56.5 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
15949286 15949286 PRJNA675042_P_NODE_176373_length_241_cov_0.916667_g175923_i0 PRJNA675042 176373 241 0.916667 2.20916747 Candidatus Stammera capleta 2608262 Bacteria Bacteria 52.8 0.022   NTclustered gi|2676815380|gb|CP144850.1| 2608262 g175923 i0 100 0.116182572614108 28 0 12 0 194 221 20515 20542 MAG: Candidatus Stammera capleta isolate BHILEGBA chromosome blastn 28 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
21048333 21048333 PRJNA675042_P_NODE_104497_length_252_cov_2.581006_g104047_i0 PRJNA675042 104497 252 2.581006 6.50413512 Candidatus Stammera capleta 2608262 Bacteria Bacteria 52.8 0.023   NTclustered gi|2676815373|gb|CP144846.1| 2608262 g104047 i0 100 0.111111111111111 28 0 11 0 217 244 190757 190730 MAG: Candidatus Stammera capleta isolate MIFJIFIK chromosome blastn 28 52.8 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;