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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA675042" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 8 ✖

bioproject 1

  • PRJNA675042 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1921843 1921843 PRJNA675042_P_NODE_101362_length_256_cov_1.333333_g100912_i0 PRJNA675042 101362 256 1.333333 3.41333248 Methanobrevibacter sp. AbM4 224719 Archaea Archaea 58.4 5e-4   NTclustered gi|509083678|gb|CP004050.1| 224719 g100912 i0 100 0.12109375 31 0 12 0 30 60 342168 342198 Methanobrevibacter sp. AbM4, complete genome blastn 31 58.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp. AbM4
4473748 4473748 PRJNA675042_P_NODE_108324_length_251_cov_0.865169_g107874_i0 PRJNA675042 108324 251 0.865169 2.17157419 Methanobrevibacter arboriphilus 39441 Archaea Archaea 52.8 0.023   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g107874 i0 96.875 0.127490039840637 32 0 13 1 88 119 2138680 2138710 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 32 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
4474714 4474714 PRJNA675042_P_NODE_25664_length_388_cov_0.977778_g25214_i0 PRJNA675042 25664 388 0.977778 3.79377864 Methanocaldococcus lauensis 2546128 Archaea Archaea 52.8 0.037   NTclustered gi|2045106419|emb|LR792632.1| 2546128 g25214 i0 100 0.0721649484536082 28 0 7 0 252 279 191670 191643 Methanocaldococcus sp. SG7 genome assembly, chromosome: I blastn 28 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus lauensis
7025664 7025664 PRJNA675042_P_NODE_43726_length_336_cov_1.000000_g43276_i0 PRJNA675042 43726 336 1 3.36 Methanococcus voltae 2188 Archaea Archaea 56.5 0.002   NTclustered gi|2891705001|gb|CP178160.1| 523842 g43276 i0 92.5 0.119047619047619 40 2 12 1 253 291 1672777 1672738 Methanococcus voltae PS chromosome, complete genome blastn 40 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus voltae
10850271 10850271 PRJNA675042_P_NODE_147909_length_245_cov_0.895349_g147459_i0 PRJNA675042 147909 245 0.895349 2.19360505 Methanococcus voltae 2188 Archaea Archaea 54.7 0.006   NTclustered gi|2891705001|gb|CP178160.1| 523842 g147459 i0 94.444 0.146938775510204 36 1 15 1 16 51 209946 209980 Methanococcus voltae PS chromosome, complete genome blastn 36 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus voltae
13400172 13400172 PRJNA675042_P_NODE_135351_length_247_cov_0.885057_g134901_i0 PRJNA675042 135351 247 0.885057 2.18609079 Methanobrevibacter smithii 2173 Archaea Archaea 52.8 0.022   NTclustered gi|1294447101|gb|CP017803.1| 2173 g134901 i0 100 0.340080971659919 28 0 11 0 198 225 795102 795075 Methanobrevibacter smithii strain KB11 chromosome, complete genome blastn 84 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
17225556 17225556 PRJNA675042_P_NODE_84714_length_275_cov_1.202970_g84264_i0 PRJNA675042 84714 275 1.20297 3.3081675 Methanobrevibacter arboriphilus 39441 Archaea Archaea 54.7 0.007   NTclustered gi|2047640843|dbj|AP019779.1| 39441 g84264 i0 100 0.105454545454545 29 0 11 0 185 213 2022776 2022748 Methanobrevibacter arboriphilus SA DNA, complete genome blastn 29 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter arboriphilus
22324331 22324331 PRJNA675042_P_NODE_40458_length_343_cov_0.911111_g40008_i0 PRJNA675042 40458 343 0.911111 3.12511073 Methanocaldococcus villosus 667126 Archaea Archaea 52.8 0.032   NTclustered gi|2891703609|gb|CP178163.1| 1069083 g40008 i0 96.875 0.0932944606413994 32 0 9 1 51 81 760352 760321 Methanocaldococcus villosus KIN24-T80 chromosome, complete genome blastn 32 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus villosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;