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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA675042" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA675042 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12126918 12126918 PRJNA675042_P_NODE_93950_length_264_cov_2.277487_g93500_i0 PRJNA675042 93950 264 2.277487 6.01256568 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 357 4.5599999999999997e-94   NTclustered gi|2028829559|gb|CP072328.1| 713051 g93500 i0 100 99.405303030303 193 0 100 0 72 264 907355 907163 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 26243 357 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349
14676637 14676637 PRJNA675042_P_NODE_8732_length_523_cov_2.051111_g8286_i0 PRJNA675042 8732 523 2.051111 10.72731053 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 749 0   NTclustered gi|158515186|gb|EU056401.1| 179883 g8286 i0 99.043 100.38240917782 418 2 99 2 4 419 606 189 Uncultured candidate division TM7 bacterium clone C12_003 16S ribosomal RNA gene, partial sequence blastn 52500 749 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
17224998 17224998 PRJNA675042_P_NODE_38554_length_347_cov_1.124088_g38104_i0 PRJNA675042 38554 347 1.124088 3.90058536 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 52.8 0.033   NTclustered gi|2621702180|emb|OY760177.1| 2044595 g38104 i0 100 0.0806916426512968 28 0 8 0 252 279 217016 216989 MAG: Candidatus Gracilibacteria bacterium isolate ba77f91b-d06a-446b-8ae6-f296fa1be4ef genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
21048278 21048278 PRJNA675042_P_NODE_100377_length_257_cov_1.565217_g99927_i0 PRJNA675042 100377 257 1.565217 4.02260769 Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 1618633 Bacteria Bacteria 56.5 0.002   NTclustered gi|837353685|gb|CP011215.1| 1618633 g99927 i0 100 0.116731517509728 30 0 12 0 94 123 382133 382162 MAG: Candidatus Campbellbacteria bacterium GW2011_OD1_34_28 chromosome, complete genome blastn 30 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Campbelliibacteriota         Candidatus Campbellbacteria bacterium GW2011_OD1_34_28

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;