RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA674308" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674308 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1166718 1166718 PRJNA674308_P_NODE_44081_length_166_cov_0.888889_g43846_i0 PRJNA674308 44081 166 0.888889 1.47555574 Mucoromycota 1913637 Fungi Fungi 307 2.69e-79   NTclustered gi|11078061|gb|AF157174.1|AF157174 29923 g43846 i0 100 100 166 0 100 0 1 166 535 370 Amylomyces rouxii 28S ribosomal RNA gene, partial sequence blastn 16600 307 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Amylomyces Amylomyces rouxii
4472794 4472794 PRJNA674308_P_NODE_40144_length_167_cov_1.279661_g39909_i0 PRJNA674308 40144 167 1.279661 2.13703387 uncultured Glomus 231055 Fungi Fungi 75 2.99e-9   NTclustered gi|909631646|emb|LN619583.1| 231055 g39909 i0 84.932 0.910179640718563 73 11 44 0 43 115 3 75 Uncultured Glomus partial 18S rRNA gene, isolate KUHTT1129 VTX00166, clone GAMF4304 blastn 152 75 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae   uncultured Glomus
13398656 13398656 PRJNA674308_P_NODE_11891_length_277_cov_159.057018_g11656_i0 PRJNA674308 11891 277 159.057018 440.58793986 Umbelopsis ramanniana 41833 Fungi Fungi 274 4.999999999999998e-69   NTclustered gi|2323695494|ref|XM_051584821.1| 1314678 g11656 i0 84.871 205.916967509025 271 41 99 0 7 277 87 357 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_214084), mRNA blastn 57039 274 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
17222761 17222761 PRJNA674308_P_NODE_24754_length_201_cov_1.026316_g24519_i0 PRJNA674308 24754 201 1.026316 2.06289516 Rhizomucor pusillus 4840 Fungi Fungi 117 6.11e-22   NTclustered gi|2837740859|ref|XM_069379198.1| 4840 g24519 i0 81.25 1.30845771144279 144 27 72 0 42 185 272 129 Rhizomucor pusillus 40S ribosomal protein uS2 (VTP01DRAFT_10797), partial mRNA blastn 263 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
22322256 22322256 PRJNA674308_P_NODE_7498_length_347_cov_1.395973_g7263_i0 PRJNA674308 7498 347 1.395973 4.84402631 Halteromyces radiatus 101107 Fungi Fungi 56.5 0.003   NTclustered gi|2323757662|ref|XM_051547092.1| 101107 g7263 i0 94.595 0.106628242074928 37 1 10 1 297 332 904 940 Halteromyces radiatus major facilitator superfamily domain-containing protein (BX664DRAFT_342118), mRNA blastn 37 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
23597803 23597803 PRJNA674308_P_NODE_7919_length_338_cov_1.799308_g7684_i0 PRJNA674308 7919 338 1.799308 6.08166104 Rhizophagus irregularis 588596 Fungi Fungi 54.7 0.009   NTclustered gi|2749791110|ref|XM_066147333.1| 588596 g7684 i0 86 0.14792899408284 50 7 15 0 60 109 671 720 Rhizophagus irregularis uncharacterized protein (OCT59_028503), partial mRNA blastn 50 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;