RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA674308" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA674308 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3718454 3718454 PRJNA674308_P_NODE_9063_length_316_cov_2.520599_g8828_i0 PRJNA674308 9063 316 2.520599 7.96509284 Entamoeba 5758 Evosea other_Eukaryota 183 1.01e-41   NTclustered gi|158940|gb|L02417.1|ENHEF2 5759 g8828 i0 85.475 4.94620253164557 179 22 56 4 119 295 464 288 Entamoeba histolytica translation elongation factor-2 (EF-2) mRNA, complete cds blastn 1563 183 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
10848848 10848848 PRJNA674308_P_NODE_3849_length_489_cov_1.872727_g3615_i0 PRJNA674308 3849 489 1.872727 9.15763503 Dictyostelium purpureum 5786 Evosea other_Eukaryota 377 6.93e-100   NTclustered gi|330791897|ref|XM_003283980.1| 5786 g3615 i0 81.41 49.0531697341513 468 82 96 3 19 485 846 1309 Dictyostelium purpureum 26S proteasome ATPase 2 subunit (DICPUDRAFT_96551), mRNA blastn 23987 377 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
12124202 12124202 PRJNA674308_P_NODE_49630_length_163_cov_1.350877_g49395_i0 PRJNA674308 49630 163 1.350877 2.20192951 Heterostelium album 2086695 Evosea other_Eukaryota 54.7 0.004   NTclustered gi|1160573070|ref|XM_020576713.1| 670386 g49395 i0 100 0.177914110429448 29 0 18 0 79 107 589 561 Polysphondylium pallidum PN500 Ras guanine nucleotide exchange factor (gefG), partial mRNA blastn 29 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
15947396 15947396 PRJNA674308_P_NODE_3113_length_551_cov_2.071713_g2882_i0 PRJNA674308 3113 551 2.071713 11.41513863 Dictyostelium sp. 5784 Evosea other_Eukaryota 320 1.35e-82   NTclustered gi|2558374474|gb|OP168901.1| 5784 g2882 i0 80.769 59.6370235934664 416 75 75 4 1 415 46451 46040 Dictyostelium sp. voucher DSC<USA-NY>:DBS0350784 mitochondrion, complete genome blastn 32860 320 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium sp.
18497123 18497123 PRJNA674308_P_NODE_35335_length_170_cov_1.677686_g35100_i0 PRJNA674308 35335 170 1.677686 2.8520662 Dictyostelium purpureum 5786 Evosea other_Eukaryota 126 8.26e-25   NTclustered gi|330845265|ref|XM_003294466.1| 5786 g35100 i0 89.109 0.594117647058824 101 11 59 0 39 139 598 698 Dictyostelium purpureum tyrosine-tRNA ligase (DICPUDRAFT_159524), partial mRNA blastn 101 126 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
19771737 19771737 PRJNA674308_P_NODE_45336_length_165_cov_0.896552_g45101_i0 PRJNA674308 45336 165 0.896552 1.4793108 Entamoeba dispar 46681 Evosea other_Eukaryota 100 4.86e-17   NTclustered gi|167393759|ref|XM_001740644.1| 370354 g45101 i0 85.417 5.66060606060606 96 14 58 0 1 96 2631 2726 Entamoeba dispar SAW760 DNA-directed RNA polymerase I subunit RPA2, putative (EDI_303700), partial mRNA blastn 934 100 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
19771838 19771838 PRJNA674308_P_NODE_6116_length_384_cov_3.322388_g5881_i0 PRJNA674308 6116 384 3.322388 12.75796992 Cavenderia fasciculata 261658 Evosea other_Eukaryota 56.5 0.003   NTclustered gi|470247590|ref|XM_004366621.1| 261658 g5881 i0 92.308 0.1015625 39 3 10 0 195 233 471 433 Cavenderia fasciculata uncharacterized protein (DFA_02288), partial mRNA blastn 39 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;