RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA674308" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA674308 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1166500 1166500 PRJNA674308_P_NODE_19881_length_220_cov_1.824561_g19646_i0 PRJNA674308 19881 220 1.824561 4.0140342 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|1145260099|ref|XM_020114913.1| 5854 g19646 i0 100 1.31363636363636 29 0 13 0 170 198 1211 1183 Plasmodium reichenowi hypothetical protein partial mRNA blastn 289 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
1920940 1920940 PRJNA674308_P_NODE_42322_length_166_cov_1.333333_g42087_i0 PRJNA674308 42322 166 1.333333 2.21333278 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|915125438|ref|XM_013478529.1| 5804 g42087 i0 94.444 0.385542168674699 36 1 22 1 16 51 1503 1469 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 64 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
3195434 3195434 PRJNA674308_P_NODE_12403_length_272_cov_2.089686_g12168_i0 PRJNA674308 12403 272 2.089686 5.68394592 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 100 8.79e-17   NTclustered gi|1620124195|ref|XM_028672920.1| 5849 g12168 i0 86.667 0.496323529411765 90 12 33 0 183 272 1405 1316 Plasmodium gallinaceum ATP-dependent protease ATPase subunit ClpY, putative (ClpY), partial mRNA blastn 135 100 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
3718193 3718193 PRJNA674308_P_NODE_22223_length_210_cov_2.000000_g21988_i0 PRJNA674308 22223 210 2 4.2 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 178 2.9099999999999998e-40   NTclustered gi|1027954645|ref|XM_016798014.1| 31271 g21988 i0 83.42 78.9952380952381 193 30 92 2 1 193 191 1 Plasmodium chabaudi chabaudi histone H4, putative (PCHAS_0902400), partial mRNA blastn 16589 178 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
6270463 6270463 PRJNA674308_P_NODE_25885_length_197_cov_1.182432_g25650_i0 PRJNA674308 25885 197 1.182432 2.32939104 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.017   NTclustered gi|1843572313|ref|XM_034565959.1| 5823 g25650 i0 92.105 0.33502538071066 38 2 19 1 20 57 1582 1546 Plasmodium berghei ANKA IGPS-like protein, putative (PBANKA_1139700), partial mRNA blastn 66 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium berghei
10848729 10848729 PRJNA674308_P_NODE_23989_length_203_cov_2.701299_g23754_i0 PRJNA674308 23989 203 2.701299 5.48363697 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 180 7.78e-41   NTclustered gi|1270522599|ref|XM_721458.2| 5861 g23754 i0 84.916 34.0443349753695 179 25 88 2 19 196 1712 1535 Plasmodium yoelii uncharacterized protein (PY17X_1242900), partial mRNA blastn 6911 180 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
13398702 13398702 PRJNA674308_P_NODE_16551_length_238_cov_3.015873_g16316_i0 PRJNA674308 16551 238 3.015873 7.17777774 Plasmodium yoelii 5861 SAR_Eukaryotes SAR_Eukaryotes 141 4.44e-29   NTclustered gi|83282436|ref|XM_724677.1| 5861 g16316 i0 88.696 6.57983193277311 115 13 48 0 1 115 746 632 Plasmodium yoelii T-complex protein 1 subunit eta, putative (PY17X_0408800), partial mRNA blastn 1566 141 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium yoelii
13398736 13398736 PRJNA674308_P_NODE_20931_length_216_cov_1.119760_g20696_i0 PRJNA674308 20931 216 1.11976 2.4186816 Plasmodium gonderi 77519 SAR_Eukaryotes SAR_Eukaryotes 62.1 3.17e-5   NTclustered gi|1620952974|ref|XM_028688548.1| 77519 g20696 i0 94.872 1.25925925925926 39 2 18 0 92 130 2934 2896 Plasmodium gonderi hypothetical protein, conserved (PGO_112100), partial mRNA blastn 272 62.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gonderi
13398919 13398919 PRJNA674308_P_NODE_45671_length_165_cov_0.896552_g45436_i0 PRJNA674308 45671 165 0.896552 1.4793108 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 300 4.46e-77   NTclustered gi|820695469|tpe|LN714488.1| 572307 g45436 i0 99.394 28.2969696969697 165 1 100 0 1 165 116332 116168 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 4669 300 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14673740 14673740 PRJNA674308_P_NODE_28692_length_188_cov_1.496403_g28457_i0 PRJNA674308 28692 188 1.496403 2.81323764 Plasmodium malariae 5858 SAR_Eukaryotes SAR_Eukaryotes 60.2 9.63e-5   NTclustered gi|1624468939|ref|XM_029008249.1| 5858 g28457 i0 88.462 0.276595744680851 52 3 26 3 64 112 2048 1997 Plasmodium malariae 60 kDa chaperonin, putative (CPN60), partial mRNA blastn 52 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
21047102 21047102 PRJNA674308_P_NODE_13097_length_265_cov_2.398148_g12862_i0 PRJNA674308 13097 265 2.398148 6.3550922 Plasmodium gaboni 647221 SAR_Eukaryotes SAR_Eukaryotes 62.1 4.02e-5   NTclustered gi|1084933524|ref|XM_018788157.1| 647221 g12862 i0 97.222 3.20377358490566 36 1 14 0 163 198 981 1016 Plasmodium gaboni hypothetical protein partial mRNA blastn 849 62.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gaboni
21568541 21568541 PRJNA674308_P_NODE_14777_length_251_cov_1.544554_g14542_i0 PRJNA674308 14777 251 1.544554 3.87683054 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 152 2.18e-32   NTclustered gi|3057043|gb|AF006204.1|AF006204 5833 g14542 i0 77.778 3.49003984063745 252 52 99 4 1 250 565 316 Plasmodium falciparum PfSec61 (PfSec61) gene, complete cds blastn 876 152 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;