RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

21 rows where analysis = "blastn", bioproject = "PRJNA674308" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 21 ✖

bioproject 1

  • PRJNA674308 · 21 ✖

analysis 1

  • blastn · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
644772 644772 PRJNA674308_P_NODE_44501_length_165_cov_2.275862_g44266_i0 PRJNA674308 44501 165 2.275862 3.7551723 Norway luteo-like virus 4 2034334 Viruses Viruses 305 9.59e-79   NTclustered gi|1240393784|gb|MF141071.1| 2034334 g44266 i0 100 4 165 0 100 0 1 165 2371 2535 Norway luteo-like virus 4 isolate NOR/S5/Kilen/2014 RNA-dependent RNA-polymerase gene, partial cds blastn 660 305 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
1920701 1920701 PRJNA674308_P_NODE_14202_length_255_cov_7.946602_g13967_i0 PRJNA674308 14202 255 7.946602 20.2638351 Sopidub virus 3131684 Viruses Viruses 169 2.2e-37   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g13967 i0 91.129 59.4509803921569 124 11 49 0 132 255 2130 2253 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 15160 169 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
1920796 1920796 PRJNA674308_P_NODE_24882_length_200_cov_1.721854_g24647_i0 PRJNA674308 24882 200 1.721854 3.443708 Malassezia restricta associated totivirus 2 3048758 Viruses Viruses 320 4.31e-83   NTclustered gi|2512878154|emb|OX637980.1| 3048758 g24647 i0 95.5 3.91 200 9 100 0 1 200 272 471 Malassezia restricta associated totivirus 2 CP gene for capsid protein blastn 782 320 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 2
1921043 1921043 PRJNA674308_P_NODE_54882_length_152_cov_2.009709_g54647_i0 PRJNA674308 54882 152 2.009709 3.05475768 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 270 3.15e-68   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g54647 i0 98.684 2 152 2 100 0 1 152 3026 3177 Malassezia restricta virus MrV40L, complete genome blastn 304 270 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
7023272 7023272 PRJNA674308_P_NODE_15746_length_244_cov_1.594872_g15511_i0 PRJNA674308 15746 244 1.594872 3.89148768 Malassezia restricta virus MrV40S 2727864 Viruses Viruses 346 9.019999999999999e-91   NTclustered gi|1832308146|gb|MN603498.1| 2727864 g15511 i0 92.245 1.00409836065574 245 18 100 1 1 244 689 933 Malassezia restricta virus MrV40S, complete genome blastn 245 346 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
7023501 7023501 PRJNA674308_P_NODE_42066_length_166_cov_59596.615385_g41831_i0 PRJNA674308 42066 166 59596.615385 98930.3815391 Betacoronavirus pandemicum 3418604 Viruses Viruses 102 1.36e-17   NTclustered gi|2155033579|emb|OV039277.1| 2697049 g41831 i0 84 11.4638554216867 125 0 63 2 62 166 30637 30513 Severe acute respiratory syndrome coronavirus 2 isolate 165 genome assembly, chromosome: 165 blastn 1903 102 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8298067 8298067 PRJNA674308_P_NODE_30407_length_183_cov_1.552239_g30172_i0 PRJNA674308 30407 183 1.552239 2.84059737 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 307 3.0100000000000005e-79   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g30172 i0 97.253 0.994535519125683 182 3 99 2 1 181 1782 1962 Malassezia restricta virus MrV40L, complete genome blastn 182 307 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
9573474 9573474 PRJNA674308_P_NODE_54308_length_159_cov_2.836364_g54073_i0 PRJNA674308 54308 159 2.836364 4.50981876 Malassezia restricta virus MrV40S 2727864 Viruses Viruses 187 3.459999999999999e-43   NTclustered gi|1832308146|gb|MN603498.1| 2727864 g54073 i0 88.387 0.974842767295597 155 18 97 0 3 157 1 155 Malassezia restricta virus MrV40S, complete genome blastn 155 187 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
10095075 10095075 PRJNA674308_P_NODE_12148_length_275_cov_1.610619_g11913_i0 PRJNA674308 12148 275 1.610619 4.42920225 Tobamovirus 12234 Viruses Viruses 503 5.809999999999998e-138   NTclustered gi|1559989139|gb|MK273185.1| 1761477 g11913 i0 99.636 100 275 1 100 0 1 275 875 601 Tomato brown rugose fruit virus isolate TAN3 RNA-dependent RNA polymerase (RdRp) gene, partial cds blastn 27500 503 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
12123881 12123881 PRJNA674308_P_NODE_12950_length_267_cov_0.885321_g12715_i0 PRJNA674308 12950 267 0.885321 2.36380707 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 422 1.62e-113   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g12715 i0 95.131 1.50187265917603 267 13 100 0 1 267 443 177 Malassezia restricta virus MrV40L, complete genome blastn 401 422 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
14673630 14673630 PRJNA674308_P_NODE_15932_length_243_cov_1.072165_g15697_i0 PRJNA674308 15932 243 1.072165 2.60536095 Tobamovirus fructirugosum 3432872 Viruses Viruses 449 6.65e-122   NTclustered gi|2048770702|gb|MW314091.1| 1761477 g15697 i0 100 100 243 0 100 0 1 243 2894 3136 Tomato brown rugose fruit virus isolate 6189975_2, partial genome blastn 24300 449 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
14673710 14673710 PRJNA674308_P_NODE_25032_length_200_cov_1.178808_g24797_i0 PRJNA674308 25032 200 1.178808 2.357616 Polemovirus PNLV 3431723 Viruses Viruses 368 1.52e-97   NTclustered gi|2419393215|gb|ON398503.1| 305785 g24797 i0 100 3.98 199 0 99 0 1 199 1220 1418 Poinsettia latent virus isolate PV-0629 P0 protein, suppressor of RNA silencing (ORF0), P1-P2 protein, RNA-dependent RNA polymerase (ORF1-ORF2), P1 protein, replication-associated protein (ORF1), and coat protein (ORF3) genes, complete cds blastn 796 368 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Sobelivirales Solemoviridae Polemovirus Polemovirus PNLV
17222733 17222733 PRJNA674308_P_NODE_22314_length_210_cov_1.291925_g22079_i0 PRJNA674308 22314 210 1.291925 2.7130425 Norway luteo-like virus 4 2034334 Viruses Viruses 388 1.24e-103   NTclustered gi|1240393781|gb|MF141070.1| 2034334 g22079 i0 100 3.00952380952381 210 0 100 0 1 210 3777 3568 Norway luteo-like virus 4 isolate NOR/B1V/Tofte/2014 RNA-dependent RNA-polymerase and coat protein genes, complete cds blastn 632 388 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales     Norway luteo-like virus 4
19771433 19771433 PRJNA674308_P_NODE_10356_length_296_cov_2.842105_g10121_i0 PRJNA674308 10356 296 2.842105 8.4126308 Malassezia restricta virus MrV40S 2727864 Viruses Viruses 309 1.48e-79   NTclustered gi|1832308146|gb|MN603498.1| 2727864 g10121 i0 96.277 0.635135135135135 188 7 64 0 1 188 916 1103 Malassezia restricta virus MrV40S, complete genome blastn 188 309 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40S
21047235 21047235 PRJNA674308_P_NODE_29277_length_186_cov_1.992701_g29042_i0 PRJNA674308 29277 186 1.992701 3.70642386 Tobamovirus mititessellati 3432879 Viruses Viruses 333 5.069999999999999e-87   NTclustered gi|443385357|gb|JX534224.2| 12241 g29042 i0 98.925 48.1344086021505 186 2 100 0 1 186 3240 3425 Tobacco mild green mosaic virus isolate Xiamen, complete genome blastn 8953 333 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus mititessellati
22322032 22322032 PRJNA674308_P_NODE_28898_length_187_cov_9840.318841_g28663_i0 PRJNA674308 28898 187 9840.318841 18401.39623267 Betacoronavirus pandemicum 3418604 Viruses Viruses 99 2.03e-16   NTclustered gi|2155033579|emb|OV039277.1| 2697049 g28663 i0 100 16.7112299465241 53 0 55 0 1 53 30565 30513 Severe acute respiratory syndrome coronavirus 2 isolate 165 genome assembly, chromosome: 165 blastn 3125 99 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22322068 22322068 PRJNA674308_P_NODE_34738_length_172_cov_1.000000_g34503_i0 PRJNA674308 34738 172 1 1.72 Tobamovirus tabaci 3432891 Viruses Viruses 259 7.92e-65   NTclustered gi|2874131729|dbj|LC612823.1| 12242 g34503 i0 93.714 101.575581395349 175 8 100 2 1 172 5913 6087 Tobacco mosaic virus Jiou genomic RNA, complete genome blastn 17471 259 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tabaci
22322117 22322117 PRJNA674308_P_NODE_40578_length_167_cov_0.881356_g40343_i0 PRJNA674308 40578 167 0.881356 1.47186452 Hebei narnavirus 13 3371267 Viruses Viruses 254 3.58e-63   NTclustered gi|2819074229|gb|PQ150570.1| 3371267 g40343 i0 96.129 1.75449101796407 155 6 93 0 13 167 244 90 MAG: Hebei narnavirus 13 isolate Hebei_112 genomic sequence blastn 293 254 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Hebei narnavirus 13
23597464 23597464 PRJNA674308_P_NODE_18759_length_226_cov_1.175141_g18524_i0 PRJNA674308 18759 226 1.175141 2.65581866 Chemarfal virus 258 3063149 Viruses Viruses 412 8.01e-111   NTclustered gi|2626079799|gb|OR270470.1| 3063149 g18524 i0 99.558 4.01327433628319 226 1 100 0 1 226 1320 1545 MAG: Chemarfal virus 258 isolate ML188 genomic sequence blastn 907 412 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 258
23597527 23597527 PRJNA674308_P_NODE_25479_length_198_cov_2.013423_g25244_i0 PRJNA674308 25479 198 2.013423 3.98657754 Chrocagost virus 3129398 Viruses Viruses 220 4.45e-53   NTclustered gi|2717317482|gb|PP171846.1| 3129398 g25244 i0 86.802 412.181818181818 197 26 99 0 2 198 5654 5850 MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence blastn 81612 220 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagost virus
25393137 25393137 PRJNA674308_P_NODE_44120_length_166_cov_0.888889_g43885_i0 PRJNA674308 44120 166 0.888889 1.47555574 Tobamovirus 12234 Viruses Viruses 307 2.69e-79   NTclustered gi|2837380181|gb|PP099897.1| 1761477 g43885 i0 100 100 166 0 100 0 1 166 4061 3896 Tomato brown rugose fruit virus isolate NPPO-NL 36648757, complete genome blastn 16600 307 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;