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contig_metadata

18 rows where analysis = "blastn", bioproject = "PRJNA674308" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 18 ✖

bioproject 1

  • PRJNA674308 · 18 ✖

analysis 1

  • blastn · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
644656 644656 PRJNA674308_P_NODE_3101_length_553_cov_1.525794_g2870_i0 PRJNA674308 3101 553 1.525794 8.43764082 Chlamydomonas reinhardtii 3055 Plants Plants 62.1 9.04e-5   NTclustered gi|2082252565|ref|XM_043065027.1| 3055 g2870 i0 100 0.547920433996383 33 0 6 0 223 255 1472 1504 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g370700v5), mRNA blastn 303 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1166776 1166776 PRJNA674308_P_NODE_5201_length_416_cov_24.673025_g4966_i0 PRJNA674308 5201 416 24.673025 102.639784 Chlamydomonas 3052 Plants Plants 760 0   NTclustered gi|2082265827|ref|XM_043070485.1| 3055 g4966 i0 100 98.9783653846154 411 0 99 0 1 411 1901 2311 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_14g634365v5), mRNA blastn 41175 760 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1920689 1920689 PRJNA674308_P_NODE_13182_length_264_cov_9.837209_g12947_i0 PRJNA674308 13182 264 9.837209 25.97023176 Chlamydomonas reinhardtii 3055 Plants Plants 483 7.219999999999998e-132   NTclustered gi|1212783794|gb|MF083691.1| 3055 g12947 i0 100 131.007575757576 261 0 100 0 4 264 39898 39638 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 34586 483 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1920775 1920775 PRJNA674308_P_NODE_21742_length_212_cov_2.263804_g21507_i0 PRJNA674308 21742 212 2.263804 4.79926448 Chlamydomonas reinhardtii 3055 Plants Plants 392 9.67e-105   NTclustered gi|162009877|gb|EU306617.1| 3055 g21507 i0 100 29.4622641509434 212 0 100 0 1 212 11058 10847 Chlamydomonas reinhardtii strain CC-1373 mt+ mitochondrion, complete genome blastn 6246 392 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
2441831 2441831 PRJNA674308_P_NODE_20502_length_217_cov_9.107143_g20267_i0 PRJNA674308 20502 217 9.107143 19.76250031 Chlamydomonadales 3042 Plants Plants 401 1.6499999999999994e-107   NTclustered gi|430007894|gb|JX888471.1| 3055 g20267 i0 100 99.9677419354839 217 0 100 0 1 217 70 286 Chlamydomonas reinhardtii strain CC-620 18S ribosomal RNA gene, partial sequence blastn 21693 401 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
6270471 6270471 PRJNA674308_P_NODE_26845_length_193_cov_3.736111_g26610_i0 PRJNA674308 26845 193 3.736111 7.21069423 Chlamydomonas 3052 Plants Plants 357 3.1499999999999996e-94   NTclustered gi|167047969|gb|EU410621.1| 3055 g26610 i0 100 101.40932642487 193 0 100 0 1 193 2379 2571 Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence blastn 19572 357 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8819496 8819496 PRJNA674308_P_NODE_14327_length_254_cov_58.921951_g14092_i0 PRJNA674308 14327 254 58.921951 149.66175554 Chlamydomonas 3052 Plants Plants 459 1.1599999999999999e-124   NTclustered gi|167047969|gb|EU410621.1| 3055 g14092 i0 99.213 100.905511811024 254 2 100 0 1 254 2097 1844 Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence blastn 25630 459 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10849002 10849002 PRJNA674308_P_NODE_989_length_1006_cov_13.923720_g842_i0 PRJNA674308 989 1006 13.92372 140.0726232 Chlamydomonas reinhardtii 3055 Plants Plants 1506 0   NTclustered gi|1212783794|gb|MF083691.1| 3055 g842 i0 93.688 127.760437375746 1014 51 99 10 1 1005 39796 40805 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 128527 1506 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12124112 12124112 PRJNA674308_P_NODE_39790_length_167_cov_294.669492_g39555_i0 PRJNA674308 39790 167 294.669492 492.09805164 Chlamydomonas sp. TK-1983 3056 Plants Plants 195 2.2e-45   NTclustered gi|174203|gb|K02345.1|CRERRA 3056 g39555 i0 100 1 105 0 100 0 1 105 105 1 Chlamydomonas sp. TK-1983 5S ribosomal RNA gene, complete sequence blastn 167 195 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. TK-1983
13398855 13398855 PRJNA674308_P_NODE_37771_length_168_cov_1.747899_g37536_i0 PRJNA674308 37771 168 1.747899 2.93647032 Chlamydomonas reinhardtii 3055 Plants Plants 311 2.11e-80   NTclustered gi|2082260566|ref|XM_043068286.1| 3055 g37536 i0 100 1 168 0 100 0 1 168 4478 4645 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g515000v5), mRNA blastn 168 311 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15947553 15947553 PRJNA674308_P_NODE_48613_length_164_cov_0.904348_g48378_i0 PRJNA674308 48613 164 0.904348 1.48313072 Nannochloris normandinae 926285 Plants Plants 292 7.41e-75   NTclustered gi|922575245|gb|JQ921007.1| 926285 g48378 i0 98.788 129.481707317073 165 1 100 1 1 164 317 481 Nannochloris normandinae strain SAG 9.82 23S large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 21235 292 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Nannochloris Nannochloris normandinae
16469470 16469470 PRJNA674308_P_NODE_3473_length_517_cov_29.920940_g3240_i0 PRJNA674308 3473 517 29.92094 154.6912598 Chlamydomonadales 3042 Plants Plants 955 0   NTclustered gi|1212783794|gb|MF083691.1| 3055 g3240 i0 100 149.025145067698 517 0 100 0 1 517 42078 41562 Chlamydomonas reinhardtii strain CC-1051 M18 (ac9) mt+ chloroplast, complete genome blastn 77046 955 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18497318 18497318 PRJNA674308_P_NODE_7895_length_338_cov_20.000000_g7660_i0 PRJNA674308 7895 338 20 67.6 Chlamydomonas reinhardtii 3055 Plants Plants 623 5.389999999999999e-174   NTclustered gi|167047969|gb|EU410621.1| 3055 g7660 i0 100 69.3698224852071 337 0 99 0 1 337 2966 3302 Chlamydomonas reinhardtii 26S ribosomal RNA gene, partial sequence blastn 23447 623 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19771859 19771859 PRJNA674308_P_NODE_8996_length_317_cov_2.679104_g8761_i0 PRJNA674308 8996 317 2.679104 8.49275968 Volvox carteri 3067 Plants Plants 180 1.31e-40   NTclustered gi|302850550|ref|XM_002956756.1| 3068 g8761 i0 88.514 45.397476340694 148 17 47 0 170 317 312 165 Volvox carteri f. nagariensis histone H4 (hstH4-4), partial mRNA blastn 14391 180 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
20292825 20292825 PRJNA674308_P_NODE_11016_length_288_cov_1.640167_g10781_i0 PRJNA674308 11016 288 1.640167 4.72368096 Prototheca 3110 Plants Plants 196 1.16e-45   NTclustered gi|1381389463|ref|NC_037449.1| 1973153 g10781 i0 80.545 8.09722222222222 257 48 89 2 33 288 27983 28238 Prototheca zopfii strain SAG 2063 mitochondrion, complete genome blastn 2332 196 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca ciferrii
21047081 21047081 PRJNA674308_P_NODE_10197_length_298_cov_18.606426_g9962_i0 PRJNA674308 10197 298 18.606426 55.44714948 Chlamydomonas reinhardtii 3055 Plants Plants 551 2.239999999999999e-152   NTclustered gi|422779560|gb|JX839535.1| 3055 g9962 i0 100 94.6342281879195 298 0 100 0 1 298 587 290 Chlamydomonas reinhardtii strain CC-621 28S ribosomal RNA gene, partial sequence blastn 28201 551 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
24118475 24118475 PRJNA674308_P_NODE_27119_length_193_cov_1.083333_g26884_i0 PRJNA674308 27119 193 1.083333 2.09083269 Marvania 97104 Plants Plants 178 2.63e-40   NTclustered gi|2724824493|gb|PP746561.1| 97105 g26884 i0 83.42 64.8549222797927 193 30 99 2 2 193 28871 28680 Marvania geminata culture SAG:12.88 mitochondrion, complete genome blastn 12517 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Marvania Marvania geminata
24118534 24118534 PRJNA674308_P_NODE_34759_length_171_cov_13.467213_g34524_i0 PRJNA674308 34759 171 13.467213 23.02893423 Chlamydomonas 3052 Plants Plants 316 4.6e-82   NTclustered gi|1233083424|gb|MF678012.1| 3055 g34524 i0 100 96.6959064327485 171 0 100 0 1 171 2160 1990 Chlamydomonas reinhardtii strain CCAP 11/32B small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 16535 316 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;