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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA674050" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 22 ✖

bioproject 1

  • PRJNA674050 · 22 ✖

analysis 1

  • blastn · 22 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2441608 2441608 PRJNA674050_P_NODE_13302_length_282_cov_4.583732_g13099_i0 PRJNA674050 13302 282 4.583732 12.92612424 Tobamovirus 12234 Viruses Viruses 521 1.6499999999999996e-143   NTclustered gi|2837380181|gb|PP099897.1| 1761477 g13099 i0 100 100 282 0 100 0 1 282 3753 3472 Tomato brown rugose fruit virus isolate NPPO-NL 36648757, complete genome blastn 28200 521 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
3194915 3194915 PRJNA674050_P_NODE_33103_length_245_cov_1.808140_g32900_i0 PRJNA674050 33103 245 1.80814 4.429943 Chrocagosk virus 3129397 Viruses Viruses 69.4 2.2e-7   NTclustered gi|2717317479|gb|PP171845.1| 3129397 g32900 i0 100 0.151020408163265 37 0 15 0 208 244 555 519 MAG: Chrocagosk virus isolate CC1A_k141_83719 genomic sequence blastn 37 69.4 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagosk virus
7023020 7023020 PRJNA674050_P_NODE_41826_length_213_cov_6.828571_g41623_i0 PRJNA674050 41826 213 6.828571 14.54485623 Leviviridae sp. 2027243 Viruses Viruses 65.8 2.41e-6   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g41623 i0 100 41.7089201877934 35 0 95 0 73 107 3011 3045 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 8884 65.8 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
7544257 7544257 PRJNA674050_P_NODE_6046_length_335_cov_1.748092_g5843_i0 PRJNA674050 6046 335 1.748092 5.8561082 Potexvirus 12176 Viruses Viruses 619 6.91e-173   NTclustered gi|2675378618|gb|PP116314.1| 112229 g5843 i0 100 86.044776119403 335 0 100 0 1 335 2627 2293 MAG: Pepino mosaic virus isolate 7452_PepMV, complete genome blastn 28825 619 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
8296532 8296532 PRJNA674050_P_NODE_10467_length_297_cov_1.200893_g10264_i0 PRJNA674050 10467 297 1.200893 3.56665221 Suillus luteus associated bunya-like virus 5 3067800 Viruses Viruses 255 1.96e-63   NTclustered gi|2560563003|gb|OQ862568.1| 3067800 g10264 i0 84.496 3.06734006734007 258 40 87 0 11 268 3934 4191 Suillus luteus associated bunya-like virus 5 isolate SlaBV5 RNA-dependent RNA polymerase gene, complete cds blastn 911 255 1 Viruses   Orthornavirae Negarnaviricota Ellioviricetes Bunyavirales     Suillus luteus associated bunya-like virus 5
9573022 9573022 PRJNA674050_P_NODE_8128_length_314_cov_1.468880_g7925_i0 PRJNA674050 8128 314 1.46888 4.6122832 Narnaviridae sp. 2583949 Viruses Viruses 60.2 1.76e-4   NTclustered gi|2183471584|gb|MZ680221.1| 2583949 g7925 i0 100 0.101910828025478 32 0 10 0 110 141 56 87 MAG: Narnaviridae sp. isolate 200-k141_438310 putative RNA-dependent RNA polymerase gene, complete cds blastn 32 60.2 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
10847522 10847522 PRJNA674050_P_NODE_16829_length_269_cov_1.392857_g16626_i0 PRJNA674050 16829 269 1.392857 3.74678533 Shenzhen dicistro-like virus 2789378 Viruses Viruses 409 1.27e-109   NTclustered gi|1940198121|gb|MT757492.1| 2789378 g16626 i0 94.052 3.00371747211896 269 16 100 0 1 269 3534 3802 Shenzhen dicistro-like virus strain CHNdp-2 polyprotein gene, complete cds blastn 808 409 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Shenzhen dicistro-like virus
10848589 10848589 PRJNA674050_P_NODE_9589_length_303_cov_1.530435_g9386_i0 PRJNA674050 9589 303 1.530435 4.63721805 Shenzhen reo-like virus 1 2789623 Viruses Viruses 477 3.9299999999999986e-130   NTclustered gi|1940198125|gb|MT757494.1| 2789623 g9386 i0 95.05 1 303 15 100 0 1 303 723 421 Shenzhen reo-like virus 1 strain CHNdp-4 hypothetical protein gene, complete cds blastn 303 477 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
11369927 11369927 PRJNA674050_P_NODE_6769_length_327_cov_1.342520_g6566_i0 PRJNA674050 6769 327 1.34252 4.3900404 Potexvirus 12176 Viruses Viruses 599 8.759999999999997e-167   NTclustered gi|375808845|gb|JN835466.1| 112229 g6566 i0 99.694 58.4709480122324 327 1 100 0 1 327 779 453 Pepino mosaic virus strain CH2, complete genome blastn 19120 599 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
11369936 11369936 PRJNA674050_P_NODE_8789_length_309_cov_1.317797_g8586_i0 PRJNA674050 8789 309 1.317797 4.07199273 Potexvirus 12176 Viruses Viruses 558 1.39e-154   NTclustered gi|2675378618|gb|PP116314.1| 112229 g8586 i0 99.351 56.831715210356 308 2 99 0 2 309 3036 2729 MAG: Pepino mosaic virus isolate 7452_PepMV, complete genome blastn 17561 558 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
13398608 13398608 PRJNA674050_P_NODE_91_length_2022_cov_3.617753_g53_i0 PRJNA674050 91 2022 3.617753 73.15096566 Tobamovirus fructirugosum 3432872 Viruses Viruses 3718 0   NTclustered gi|2201445642|gb|OM515246.1| 1761477 g53 i0 99.852 100 2022 3 100 0 1 2022 3466 1445 Tomato brown rugose fruit virus isolate 39986364, complete genome blastn 202200 3718 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
14673449 14673449 PRJNA674050_P_NODE_552_length_957_cov_7.289593_g397_i0 PRJNA674050 552 957 7.289593 69.76140501 Tobamovirus fructirugosum 3432872 Viruses Viruses 1768 0   NTclustered gi|2201445642|gb|OM515246.1| 1761477 g397 i0 100 100 957 0 100 0 1 957 4788 5744 Tomato brown rugose fruit virus isolate 39986364, complete genome blastn 95700 1768 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
15947145 15947145 PRJNA674050_P_NODE_793_length_780_cov_6.454031_g617_i0 PRJNA674050 793 780 6.454031 50.3414418 Tobamovirus fructirugosum 3432872 Viruses Viruses 1441 0   NTclustered gi|2837380407|gb|PP099942.1| 1761477 g617 i0 100 100 780 0 100 0 1 780 4496 3717 Tomato brown rugose fruit virus isolate NPPO-NL 41927291, complete genome blastn 78000 1441 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
17222180 17222180 PRJNA674050_P_NODE_3494_length_387_cov_1.726115_g3291_i0 PRJNA674050 3494 387 1.726115 6.68006505 Shenzhen reo-like virus 1 2789623 Viruses Viruses 593 4.9e-165   NTclustered gi|1940198125|gb|MT757494.1| 2789623 g3291 i0 94.315 1 387 22 100 0 1 387 3582 3968 Shenzhen reo-like virus 1 strain CHNdp-4 hypothetical protein gene, complete cds blastn 387 593 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
19018048 19018048 PRJNA674050_P_NODE_395_length_1160_cov_2.668813_g266_i0 PRJNA674050 395 1160 2.668813 30.9582308 Tobamovirus 12234 Viruses Viruses 2141 0   NTclustered gi|2837380407|gb|PP099942.1| 1761477 g266 i0 100 99.9137931034483 1159 0 99 0 1 1159 230 1388 Tomato brown rugose fruit virus isolate NPPO-NL 41927291, complete genome blastn 115900 2141 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
22321180 22321180 PRJNA674050_P_NODE_28078_length_248_cov_1.920000_g27875_i0 PRJNA674050 28078 248 1.92 4.7616 Ripastyr virus 3131364 Viruses Viruses 442 1.1399999999999995e-119   NTclustered gi|2717322326|gb|PP173666.1| 3131364 g27875 i0 98.79 796.612903225806 248 3 100 0 1 248 405 158 MAG: Ripastyr virus isolate MP3_k141_6580 genomic sequence blastn 197560 442 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripastyr virus
22321659 22321659 PRJNA674050_P_NODE_41038_length_232_cov_2.572327_g40835_i0 PRJNA674050 41038 232 2.572327 5.96779864 Shenzhen reo-like virus 1 2789623 Viruses Viruses 335 1.8399999999999992e-87   NTclustered gi|1940198125|gb|MT757494.1| 2789623 g40835 i0 92.735 1.00862068965517 234 13 100 4 1 232 3477 3246 Shenzhen reo-like virus 1 strain CHNdp-4 hypothetical protein gene, complete cds blastn 234 335 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales     Shenzhen reo-like virus 1
24118202 24118202 PRJNA674050_P_NODE_1139_length_633_cov_6.496429_g945_i0 PRJNA674050 1139 633 6.496429 41.12239557 Tobamovirus 12234 Viruses Viruses 1170 0   NTclustered gi|2837380407|gb|PP099942.1| 1761477 g945 i0 100 100 633 0 100 0 1 633 5714 6346 Tomato brown rugose fruit virus isolate NPPO-NL 41927291, complete genome blastn 63300 1170 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus fructirugosum
24870211 24870211 PRJNA674050_P_NODE_32580_length_246_cov_0.895954_g32377_i0 PRJNA674050 32580 246 0.895954 2.20404684 Orthonoravirus melanogastri 3060507 Viruses Viruses 438 1.4599999999999996e-118   NTclustered gi|822478482|gb|KP970089.1| 3071212 g32377 i0 98.78 38.7276422764228 246 3 100 0 1 246 4039 4284 Nora virus isolate IM13 gp1 (gp1) gene, partial cds; replication polyprotein (gp2) and gp3 (gp3) genes, complete cds; and capsid protein (gp4) gene, partial cds blastn 9527 438 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Noraviridae Orthonoravirus Orthonoravirus melanogastri
24870557 24870557 PRJNA674050_P_NODE_42260_length_198_cov_10.832000_g42057_i0 PRJNA674050 42260 198 10.832 21.44736 Betacoronavirus pandemicum 3418604 Viruses Viruses 111 2.79e-20   NTclustered gi|2155033579|emb|OV039277.1| 2697049 g42057 i0 100 25.6464646464646 60 0 88 0 126 185 30567 30508 Severe acute respiratory syndrome coronavirus 2 isolate 165 genome assembly, chromosome: 165 blastn 5078 111 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
25392832 25392832 PRJNA674050_P_NODE_7920_length_316_cov_1.275720_g7717_i0 PRJNA674050 7920 316 1.27572 4.0312752 Potexvirus 12176 Viruses Viruses 582 8.489999999999998e-162   NTclustered gi|2675378618|gb|PP116314.1| 112229 g7717 i0 100 57.8101265822785 315 0 99 0 2 316 1689 1375 MAG: Pepino mosaic virus isolate 7452_PepMV, complete genome blastn 18268 582 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini
25392835 25392835 PRJNA674050_P_NODE_8640_length_310_cov_1.565401_g8437_i0 PRJNA674050 8640 310 1.565401 4.8527431 Potexvirus 12176 Viruses Viruses 573 4.999999999999998e-159   NTclustered gi|2675378618|gb|PP116314.1| 112229 g8437 i0 100 100 310 0 100 0 1 310 5061 4752 MAG: Pepino mosaic virus isolate 7452_PepMV, complete genome blastn 31000 573 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus pepini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;