RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA674050" and tax_clade = "unclassified ssRNA positive-strand viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • unclassified ssRNA positive-strand viruses · 7 ✖

bioproject 1

  • PRJNA674050 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
644288 644288 PRJNA674050_P_NODE_4301_length_364_cov_2.646048_g4098_i0 PRJNA674050 4301 364 2.646048 9.63161472 Drosophila A virus 595895 Viruses Viruses 623 5.839999999999999e-174   NTclustered gi|253761971|ref|NC_012958.1| 595895 g4098 i0 97.527 18.760989010989 364 9 100 0 1 364 4670 4307 Drosophila A virus, complete genome blastn 6829 623 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
8296586 8296586 PRJNA674050_P_NODE_1227_length_604_cov_1.868173_g1030_i0 PRJNA674050 1227 604 1.868173 11.28376492 Drosophila A virus 595895 Viruses Viruses 1057 0   NTclustered gi|822478150|gb|KP969950.1| 595895 g1030 i0 98.339 30.9950331125828 602 10 99 0 1 602 2046 1445 Drosophila A virus isolate Qdelta_DrosophilaA RNA-dependent RNA polymerase and capsid precursor, genes, partial cds blastn 18721 1057 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
12123728 12123728 PRJNA674050_P_NODE_6210_length_333_cov_1.773077_g6007_i0 PRJNA674050 6210 333 1.773077 5.90434641 Drosophila A virus 595895 Viruses Viruses 571 1.95e-158   NTclustered gi|822478144|gb|KP969948.1| 595895 g6007 i0 97.612 25.1501501501502 335 5 99 2 2 333 640 974 Drosophila A virus isolate XIB_DrosophilaA RNA-dependent RNA polymerase gene, complete cds; and capsid precursor, gene, partial cds blastn 8375 571 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
17221535 17221535 PRJNA674050_P_NODE_1774_length_501_cov_2.385514_g1575_i0 PRJNA674050 1774 501 2.385514 11.95142514 Drosophila A virus 595895 Viruses Viruses 887 0   NTclustered gi|822478147|gb|KP969949.1| 595895 g1575 i0 98.603 31.3532934131737 501 7 100 0 1 501 3104 2604 Drosophila A virus isolate delta11_DrosophilaA RNA-dependent RNA polymerase and capsid precursor, genes, partial cds blastn 15708 887 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
18496840 18496840 PRJNA674050_P_NODE_715_length_829_cov_3.039683_g546_i0 PRJNA674050 715 829 3.039683 25.19897207 Drosophila A virus 595895 Viruses Viruses 1428 0   NTclustered gi|822478150|gb|KP969950.1| 595895 g546 i0 97.708 36.8214716525935 829 19 100 0 1 829 4249 3421 Drosophila A virus isolate Qdelta_DrosophilaA RNA-dependent RNA polymerase and capsid precursor, genes, partial cds blastn 30525 1428 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
22321763 22321763 PRJNA674050_P_NODE_6738_length_327_cov_2.960630_g6535_i0 PRJNA674050 6738 327 2.96063 9.6812601 Drosophila A virus 595895 Viruses Viruses 569 6.869999999999998e-158   NTclustered gi|822478150|gb|KP969950.1| 595895 g6535 i0 98.16 19.7584097859327 326 6 99 0 2 327 2613 2288 Drosophila A virus isolate Qdelta_DrosophilaA RNA-dependent RNA polymerase and capsid precursor, genes, partial cds blastn 6461 569 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus
22321817 22321817 PRJNA674050_P_NODE_8358_length_312_cov_2.096234_g8155_i0 PRJNA674050 8358 312 2.096234 6.54025008 Drosophila A virus 595895 Viruses Viruses 553 6.559999999999998e-153   NTclustered gi|822478147|gb|KP969949.1| 595895 g8155 i0 98.714 39.8717948717949 311 4 99 0 2 312 3161 3471 Drosophila A virus isolate delta11_DrosophilaA RNA-dependent RNA polymerase and capsid precursor, genes, partial cds blastn 12440 553 1 Viruses unclassified ssRNA positive-strand viruses             Drosophila A virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;