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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA674048 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4994274 4994274 PRJNA674048_P_NODE_23644_length_181_cov_1.181818_g23441_i0 PRJNA674048 23644 181 1.181818 2.13909058 root 1 Root_unresolved Root_unresolved 335 1.36e-87   NTclustered gi|253971047|gb|GQ249655.1| 29281 g23441 i0 100 99.9889502762431 181 0 100 0 1 181 317 497 Uncultured crenarchaeote clone D06-arc 16S ribosomal RNA gene, partial sequence blastn 18098 335 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
6270001 6270001 PRJNA674048_P_NODE_29445_length_166_cov_0.888889_g29242_i0 PRJNA674048 29445 166 0.888889 1.47555574 Halalkalicoccus 332246 Archaea Archaea 292 7.52e-75   NTclustered gi|507148368|ref|NR_103171.1| 413810 g29242 i0 98.78 178.030120481928 164 2 99 0 3 166 1262 1099 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 29553 292 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
6270036 6270036 PRJNA674048_P_NODE_31645_length_163_cov_0.912281_g31442_i0 PRJNA674048 31645 163 0.912281 1.48701803 Haloarcula 2237 Archaea Archaea 132 1.7e-26   NTclustered gi|343781660|gb|CP002921.1| 634497 g31442 i0 84.733 5.77914110429448 131 20 80 0 30 160 2336111 2336241 Haloarcula hispanica ATCC 33960 chromosome I, complete sequence blastn 942 132 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Haloarcula Haloarcula hispanica
19017566 19017566 PRJNA674048_P_NODE_14895_length_232_cov_2.841530_g14692_i0 PRJNA674048 14895 232 2.84153 6.5923496 root 1 Root_unresolved Root_unresolved 429 8.2e-116   NTclustered gi|3108087|gb|AF058730.1| 75624 g14692 i0 100 100 232 0 100 0 1 232 481 712 Uncultured crenarchaeote KBSNat20 16S ribosomal RNA gene, partial sequence blastn 23200 429 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote KBSNat20
21045703 21045703 PRJNA674048_P_NODE_30577_length_164_cov_1.808696_g30374_i0 PRJNA674048 30577 164 1.808696 2.96626144 Candidatus Nitrosocosmicus oleophilus 1353260 Archaea Archaea 303 3.42e-78   NTclustered gi|937513727|gb|CP012850.1| 1353260 g30374 i0 100 19.4024390243902 164 0 100 0 1 164 848071 848234 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 3182 303 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
21568154 21568154 PRJNA674048_P_NODE_27277_length_169_cov_0.866667_g27074_i0 PRJNA674048 27277 169 0.866667 1.46466723 Candidatus Nitrosocosmicus 1826864 Archaea Archaea 313 5.859999999999999e-81   NTclustered gi|937513727|gb|CP012850.1| 1353260 g27074 i0 100 85.3846153846154 169 0 100 0 1 169 847994 847826 Candidatus Nitrosocosmicus oleophilus strain MY3, complete genome blastn 14430 313 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Candidatus Nitrosocosmicus Candidatus Nitrosocosmicus oleophilus
22843268 22843268 PRJNA674048_P_NODE_10418_length_291_cov_0.979339_g10215_i0 PRJNA674048 10418 291 0.979339 2.84987649 Halalkalicoccus 332246 Archaea Archaea 483 8.069999999999998e-132   NTclustered gi|507148368|ref|NR_103171.1| 413810 g10215 i0 96.564 77.7938144329897 291 10 100 0 1 291 383 93 Halalkalicoccus jeotgali strain B3 23S ribosomal RNA gene, complete sequence blastn 22638 483 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus jeotgali
25392378 25392378 PRJNA674048_P_NODE_18820_length_204_cov_1.270968_g18617_i0 PRJNA674048 18820 204 1.270968 2.59277472 Archaea 2157 Archaea Archaea 377 2.59e-100   NTclustered gi|315585451|gb|HQ647201.1| 29281 g18617 i0 100 102 204 0 100 0 1 204 62 265 Uncultured crenarchaeote clone Hm5_rock_SK477 16S ribosomal RNA gene, partial sequence blastn 20808 377 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;