contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_phylum = "Oomycota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4470995 | 4470995 | PRJNA674048_P_NODE_15964_length_223_cov_1.218391_g15761_i0 | PRJNA674048 | 15964 | 223 | 1.218391 | 2.71701193 | Albugo laibachii | 653948 | SAR_Eukaryotes | SAR_Eukaryotes | 121 | 5.35e-23 | NTclustered | gi|325195177|emb|FR825972.1| | 890382 | g15761 | i0 | 79.33 | 90.2242152466368 | 179 | 32 | 79 | 5 | 17 | 192 | 476 | 300 | Albugo laibachii Nc14, genomic contig CONTIG_3045_NC14_v4_482_22195 | blastn | 20120 | 121 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Albuginales | Albuginaceae | Albugo | Albugo laibachii | ||
| 7543976 | 7543976 | PRJNA674048_P_NODE_29946_length_165_cov_1.344828_g29743_i0 | PRJNA674048 | 29946 | 165 | 1.344828 | 2.2189662 | Phytophthora | 4783 | SAR_Eukaryotes | SAR_Eukaryotes | 132 | 1.72e-26 | NTclustered | gi|2651588941|gb|PP108234.1| | 4785 | g29743 | i0 | 81.988 | 58.7393939393939 | 161 | 24 | 97 | 3 | 6 | 165 | 5630 | 5474 | Phytophthora cinnamomi strain ACCC_36284 mitochondrion, complete genome | blastn | 9692 | 132 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora cinnamomi | ||
| 10094734 | 10094734 | PRJNA674048_P_NODE_28548_length_167_cov_0.881356_g28345_i0 | PRJNA674048 | 28548 | 167 | 0.881356 | 1.47186452 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 134 | 4.86e-27 | NTclustered | gi|2627915470|ref|NC_084365.1| | 192975 | g28345 | i0 | 81.595 | 97.8083832335329 | 163 | 28 | 97 | 2 | 1 | 162 | 18726 | 18887 | Phytophthora meadii mitochondrion, complete genome | blastn | 16334 | 134 | 1 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora meadii | ||
| 15194540 | 15194540 | PRJNA674048_P_NODE_21672_length_189_cov_1.485714_g21469_i0 | PRJNA674048 | 21672 | 189 | 1.485714 | 2.80799946 | Peronosporaceae | 4777 | SAR_Eukaryotes | SAR_Eukaryotes | 171 | 4.29e-38 | NTclustered | gi|2248513276|ref|NC_063801.1| | 538568 | g21469 | i0 | 85.119 | 75.6296296296296 | 168 | 23 | 88 | 2 | 23 | 189 | 30052 | 30218 | Phytophthora pinifolia culture CBS:122922 mitochondrion, complete genome | blastn | 14294 | 172 | 0.994186046511628 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Peronosporales | Peronosporaceae | Phytophthora | Phytophthora pinifolia | ||
| 21567914 | 21567914 | PRJNA674048_P_NODE_10517_length_289_cov_1.625000_g10314_i0 | PRJNA674048 | 10517 | 289 | 1.625 | 4.69625 | Globisporangium | 1448052 | SAR_Eukaryotes | SAR_Eukaryotes | 224 | 5.359999999999999e-54 | NTclustered | gi|482660259|gb|JX397975.1| | 115419 | g10314 | i0 | 84.255 | 83.242214532872 | 235 | 31 | 80 | 3 | 58 | 289 | 88 | 319 | Pythium paddicum strain CBS 69883 cytochrome c oxidase subunit I (COX1) gene, partial cds; mitochondrial | blastn | 24057 | 226 | 0.991150442477876 | Eukaryota | Sar | Oomycota | Peronosporomycetes | Pythiales | Pythiaceae | Globisporangium | Globisporangium paddicum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;