RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA674048" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA674048 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
642956 642956 PRJNA674048_P_NODE_12801_length_255_cov_1.009709_g12598_i0 PRJNA674048 12801 255 1.009709 2.57475795 Gamsiella multidivaricata 101098 Fungi Fungi 62.1 3.85e-5   NTclustered gi|2323769099|ref|XM_051553745.1| 101098 g12598 i0 100 8.71372549019608 33 0 13 0 213 245 1763 1731 Gamsiella multidivaricata Endonuclease/exonuclease/phosphatase (BC939DRAFT_437852), mRNA blastn 2222 62.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
8296328 8296328 PRJNA674048_P_NODE_10667_length_286_cov_2.869198_g10464_i0 PRJNA674048 10667 286 2.869198 8.20590628 Gamsiella multidivaricata 101098 Fungi Fungi 132 3.3e-26   NTclustered gi|2323790419|ref|XM_051551770.1| 101098 g10464 i0 84.559 1.66783216783217 136 18 48 3 139 274 523 391 Gamsiella multidivaricata uncharacterized protein (BC939DRAFT_382620), partial mRNA blastn 477 132 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
13397181 13397181 PRJNA674048_P_NODE_19471_length_200_cov_1.827815_g19268_i0 PRJNA674048 19471 200 1.827815 3.65563 Calcarisporiella thermophila 911321 Fungi Fungi 93.5 1.02e-14   NTclustered gi|2837881530|ref|XM_069398773.1| 911321 g19268 i0 92.308 5.105 65 5 33 0 14 78 167 103 Calcarisporiella thermophila 40S ribosomal protein uS17 (VTP21DRAFT_7973), partial mRNA blastn 1021 93.5 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;